Pairwise Alignments

Query, 786 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC100

Subject, 796 a.a., UvsW helicase from Alteromonas macleodii MIT1002

 Score =  441 bits (1135), Expect = e-128
 Identities = 259/686 (37%), Positives = 381/686 (55%), Gaps = 27/686 (3%)

Query: 8   DELAALRAENARLVSLLEAHGIEWRRKPQTPVQRVSVLSTDEKVALFRRLFRGRDDVWAL 67
           ++  AL  E + L+    AH  ++  + +TP         + KVALF++ FRGR+DV+  
Sbjct: 22  EQKTALLNERSALLQQSMAHQAQYFSQSETP---------EAKVALFKQYFRGREDVYPF 72

Query: 68  RWESKTSGKSGYSPACANEWQARICGKPRIKCGDCAHRQLIPVSDLVIYHHLAGTHTVGM 127
           RWESK  GK+GYSP+CANEWQA IC KP+  C +CAH+      D  I  HL G  T+G+
Sbjct: 73  RWESK-QGKAGYSPSCANEWQAGICNKPKTACSECAHQAFHRFDDSAINAHLRGQRTIGI 131

Query: 128 YPLLEDDSCYFLAVDFDEAEWQKDASAFMRSCDELGVPAALEISRSRQGAHVWIFFASRV 187
           YPL   + CY LA DFD+ +W +  SA    C+ L +   +E SRS QG H+W+FF    
Sbjct: 132 YPLTAQNECYLLAFDFDKTDWFEAISALRNVCESLSIGYLVERSRSGQGGHLWLFFEKAT 191

Query: 188 SAREARRLGTAIISYTCSRTRQLRLGSYDRLFPNQDTMPKGGFGNLIALPLQKRPRELGG 247
            A+ +R+LGTA+++ T      L    +DR+FPNQD +P GG GNLIALPLQK+PR  G 
Sbjct: 192 DAKSSRQLGTALLNLTMDTYPALNFDCFDRMFPNQDVLPSGGMGNLIALPLQKQPRLSGN 251

Query: 248 SVFVDMNLQPYPDQWAFLVSVTPMNVQDIEPTILRATGSIHPLDVNFINEEDLGTPWEEK 307
           + F+D +     DQW  L +   ++   I   + R    +   DV     E    PWE+ 
Sbjct: 252 ACFIDTDGGVVEDQWQALAATGKLSPDTIRQLLERLADYV---DVEPQVAE--LKPWEKS 306

Query: 308 KSSGNRLNISIAEPLKITLANQIYFEKAQLPQVLINRLIRLAAFPNPEFYKAQAMRMSVW 367
            +            + I +A+++Y   A LP  L+  L +LA F NPEF+K QAMR S  
Sbjct: 307 TTLNTPKIDDCPATIDIVVADKLYIAIAVLPNKLVATLKKLAVFANPEFFKRQAMRFSTI 366

Query: 368 NKPRVIGCAENYPQHIALPRGCLDSVLSFLRDNNIAAELIDKRFAGTECNAV-FMGNLRA 426
             PR +  A     ++ LPRG    V + L          DKR+AG    A+ F G LR+
Sbjct: 367 GVPRYLCAAHIESGYLHLPRGLKGQVEALLEQQACTIRYQDKRYAGQRLPALRFEGTLRS 426

Query: 427 EQEEAVSALLRYDTGVLCAPTAFGKTVTAAAVIAKRKVNTLILVHRTELLKQWQERLAVF 486
           +Q +A+ ALL  + G++ A T FGKTV A A+IAKR VNTL+LVH   L +QW ER  +F
Sbjct: 427 QQAKALKALLENEHGLVIANTGFGKTVVALALIAKRAVNTLVLVHNKALAEQWIERCKIF 486

Query: 487 LQAGDSIGIIGGGKHKPCGNIDIAVVQS-ISRQG-EVEPLVRNYGQIIVDECHHIGAVSF 544
           L+  + +G + GGK K  G ID+A  QS ISR G ++   V +YGQIIVDECHHI A ++
Sbjct: 487 LKDAE-MGSLLGGKDKLNGRIDVATYQSLISRNGIDIHDKVDSYGQIIVDECHHIPASNY 545

Query: 545 SAILKETNARYLLGLTATPIRRDGLHPIIFMYCGAI----RHTAVRPKESPH--NLEVLI 598
             +LK    ++L+G TATP R+DGL  +++   GA+    +  ++   ++ +  + ++  
Sbjct: 546 ETLLKNVAPQFLVGFTATPKRQDGLEKLMYFQLGAVLFESKPASLTFSQTAYCCDTQIAF 605

Query: 599 RSRFTSGHLPSDARIQDIFREIALDHDRTVAIAEEAMKAFGQGRKVLVLTERTDHLDEIA 658
            + +  G  P   +I  +++ +  +  R   I     +A    R+ LVL+ER +H+  ++
Sbjct: 606 PATWVDGSEP--VKITQLYQYLQDNASRNQLITRSIAQAIEAKRQCLVLSERKEHIAILS 663

Query: 659 SVMNSLKLSPFILHGRLSKKKRAMLI 684
             +N+  ++   LHG +S K R   I
Sbjct: 664 EQLNTQGINTIELHGGVSTKIRKQRI 689