Pairwise Alignments

Query, 440 a.a., PTS cellobiose transporter subunit IIC from Escherichia coli ECOR38

Subject, 691 a.a., PTS sugar transporter subunit IIC from Pseudomonas simiae WCS417

 Score =  120 bits (301), Expect = 1e-31
 Identities = 116/431 (26%), Positives = 194/431 (45%), Gaps = 71/431 (16%)

Query: 22  LNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILSPDGFIAGLLHLNSIFPNLEKAQAI 81
           L S + + A+R+G ++  P ++ S+      F ILS     A +L  ++      +  A 
Sbjct: 17  LASTESLRAIREGLLWILPCLLVSA-----GFLILSE---CARMLGFDA------QVVAF 62

Query: 82  FTPVMNGSVNIMSIMIAFLVARNVAISYEQDDLLCGLTAIGAFFIVYTPYQMIDGQAFLT 141
           F  + N   +++ +++A  +   +AI +    L      + A  +V T         F+ 
Sbjct: 63  FAGLHNQISSVIPLLVAASIGYMLAIQHRLPQLPVAFLCL-AHVVVAT---------FIL 112

Query: 142 TKYLGAQG---LFVAVIVALITSEIFCRLAR--------------NPKITITMPAAVPPA 184
            +Y  A     LF+A+   L+       L R              N + TI M   VP A
Sbjct: 113 REYPRASATFVLFIAIASPLLNVPAIAWLHRYRWTRLVNEDLVGHNLRGTINM--VVPGA 170

Query: 185 VARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQTPLKHMGTNIFAVIILGA 244
           +       L +  V+     + Y   L  P  L+ L     ++P    G+ +F  ++   
Sbjct: 171 ITA-----LALVVVLSLLLQIPYVAQLQGPQVLHAL-----ESPY---GSGLFVTLM--- 214

Query: 245 VGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWGAPYPITW---TSINDAF 301
             + LW  GIHG      + + V  +A        A +G    A  PI +   + +  +F
Sbjct: 215 -NSLLWFFGIHGVYAMQPLFD-VLDQA-------VALNGAASAAGEPINYLLNSGLLGSF 265

Query: 302 ANCGGSGMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIVLNPIMMVPF 361
           A  GGSG  L LLLAI + SK    R LA  S    +FN++E ++FGLPI+LNP + +PF
Sbjct: 266 AFIGGSGGALCLLLAILLFSKSQSMRLLAMASLPLSLFNVSEVLLFGLPIILNPRLFIPF 325

Query: 362 IMVPIVNCAIGYFFVSMEIIPPVAYAVPWTTPGPLIAFLGTGGNWLALLVGFLCLGVATM 421
           ++VP +N  +    V M  + P   +VP T P  L A+L T G++ A+ +    LG+ T+
Sbjct: 326 LVVPALNAMVALTVVQMGWVSPAVVSVPLTAPVLLNAYLSTHGDFAAVALQLTLLGLGTL 385

Query: 422 IYLPFVIAANK 432
           +Y P+V+A ++
Sbjct: 386 VYAPYVLAIHR 396