Pairwise Alignments

Query, 440 a.a., PTS cellobiose transporter subunit IIC from Escherichia coli ECOR38

Subject, 452 a.a., PTS system, chitobiose-specific IIC component (EC 2.7.1.69) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  265 bits (676), Expect = 3e-75
 Identities = 160/443 (36%), Positives = 251/443 (56%), Gaps = 19/443 (4%)

Query: 4   MASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILS-PDG-- 60
           M++    +E+ L+P A+K+  Q HV A+++GF+   P+ +A ++ +LIN   LS  +G  
Sbjct: 1   MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSF 60

Query: 61  -FIAGLLHLNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNVAISYEQDDLLCGLT 119
            +  G+    S    L   + I   V NG++ IMS+M  F +   +A   + D L  GL 
Sbjct: 61  FYSMGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLL 120

Query: 120 AIGAFFIVYTPYQMIDGQAFLT-TKYLGAQGLFVAVIVALITSEIFCRLARNPKITITMP 178
           ++ AF  V TPY +  G+A+     +LG   +   +I+ L+ +E+F  + R   + I +P
Sbjct: 121 SVAAFMTV-TPYSV--GEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWV-IKLP 176

Query: 179 AAVPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQTPLKHMGTNI-F 237
            +VP +V+RSF  L+P F ++     +++ L+    +  + +I   I TPL  +G+ + +
Sbjct: 177 DSVPASVSRSFSALIPGFIILSIMGIISWALSNYG-SNFHQIIMDTISTPLASLGSVVGW 235

Query: 238 AVIILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTT-----WGAPYPI 292
           A +I   +   LW  GIHG    +A+   + +   LEN+S   Q+G+       G  + I
Sbjct: 236 AYVIFVPL---LWFFGIHGSLALTALDSGIMTPWALENISIYQQYGSVDAALEAGKTFHI 292

Query: 293 TWTSINDAFANCGGSGMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIV 352
               + D++   GGSG TLGL++AIF+AS+RA+YR +AK++   GIF INEPI+FGLPI+
Sbjct: 293 WAKPMLDSYIFLGGSGATLGLIIAIFLASRRADYRQVAKLALPSGIFQINEPILFGLPII 352

Query: 353 LNPIMMVPFIMVPIVNCAIGYFFVSMEIIPPVAYAVPWTTPGPLIAFLGTGGNWLALLVG 412
           +NP+M +PFI+V  +  AI      + IIPP+    PWT P  L AF  T G+  ALLV 
Sbjct: 353 MNPVMFIPFILVQPILAAITLVAYYLGIIPPITNIAPWTMPTGLGAFFNTNGSVAALLVA 412

Query: 413 FLCLGVATMIYLPFVIAANKVNN 435
              L VAT+IYLPFV+ ANK  N
Sbjct: 413 LFNLAVATLIYLPFVVVANKAQN 435