Pairwise Alignments

Query, 282 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECOR38

Subject, 327 a.a., L-arabinose ABC transporter permease AraH from Serratia liquefaciens MT49

 Score =  142 bits (358), Expect = 1e-38
 Identities = 83/240 (34%), Positives = 131/240 (54%)

Query: 5   VSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVATLGT 64
           +SV S+     V   +++N   SL +   A LLLG+++G  NG ++A LKI A++ TL T
Sbjct: 78  LSVASVIACAGVTTAVVINMTESLWIGVGAGLLLGMVSGLINGFVIARLKINALITTLAT 137

Query: 65  LGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVSAIGWLTIILVAFMAWLLAKTAFGR 124
           + ++RG+  + + GK +         L      G+ A  W+T+  +    +LL KT FGR
Sbjct: 138 MQIFRGLAYIISDGKAVGIEDERFFTLGYANWLGLPAPIWITVACLILFGFLLNKTTFGR 197

Query: 125 SFYVTGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGLEMKA 184
           +    G N + AR  GV     +IV F L+G ++A AGI+ AS++      T  G E+  
Sbjct: 198 NTLAIGGNEEAARLAGVPVVRTKIVIFMLSGLVSAAAGIILASRMTSGQPMTSIGYELIV 257

Query: 185 IAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGMVLLAVLVFD 244
           I+ACVLGG+SL GG G I   + G   L  +++ + LL I  +    + G++LLA ++FD
Sbjct: 258 ISACVLGGVSLKGGIGKISYVIAGILILGTVENAMNLLNISPFSQYVVRGVILLAAVIFD 317