Pairwise Alignments

Query, 282 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECOR38

Subject, 336 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  135 bits (340), Expect = 1e-36
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 1/241 (0%)

Query: 2   QTSVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVAT 61
           +  +SV +I  + +  +G  +  G   P      +  GL  G FNG LVA LK+P+IV T
Sbjct: 82  EIDLSVAAIIALASTAMGAAVQMGVGTPGLVAIGIGTGLFCGAFNGFLVAGLKLPSIVVT 141

Query: 62  LGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVSAIGWLTIILVAFM-AWLLAKT 120
           +GT+ L+RGI  +  G +     PA+        +F V +  ++  I++A + A LL  T
Sbjct: 142 IGTMSLFRGISYMVLGDQAYGKYPADFAYFGQGYVFWVISFEFVLFIVMAVLFAILLHAT 201

Query: 121 AFGRSFYVTGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGL 180
            FGR  YV G N   AR  G+  E ++ + F L G M+ +A +   S++G        G 
Sbjct: 202 NFGRQVYVIGTNPFAARFSGIPVERVKFILFLLTGLMSGIAAVCLTSRLGSTRPSIAQGW 261

Query: 181 EMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGMVLLAV 240
           E++ +   VLGG+S+LGGSG I G V+ A+ +  +   L LL +P        G++L+  
Sbjct: 262 ELEVVTMVVLGGVSILGGSGTIAGVVIAAFVMGLVTFGLGLLNVPGIVMSIFVGLLLIIT 321

Query: 241 L 241
           +
Sbjct: 322 I 322