Pairwise Alignments

Query, 460 a.a., diguanylate cyclase DosC from Escherichia coli ECOR38

Subject, 308 a.a., GGDEF domain protein from Pseudomonas fluorescens GW456-L13

 Score =  124 bits (310), Expect = 6e-33
 Identities = 82/241 (34%), Positives = 122/241 (50%), Gaps = 13/241 (5%)

Query: 215 ADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRN 274
           +D  L F  +G H  S    + H    + +     NQ        N  SL    L  +RN
Sbjct: 79  SDLRLEFGQRGHHSIS--YSLSHEGEHLGELIFRRNQRFSEQDQGNLESLLAALLFPMRN 136

Query: 275 TVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334
            +     L R   +   R     D LT   NR  +    +REI  + R   PLSVL++D+
Sbjct: 137 AL-----LYRTATQSALR-----DPLTGAGNRIAMDQTLQREIELSRRHLQPLSVLMLDI 186

Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394
           D FK +NDT GH+TGD++L+ V+    + +R+ D VFRYGG+EF+I+L+           
Sbjct: 187 DHFKLVNDTHGHSTGDDVLKAVAATIKNQLRNVDMVFRYGGEEFLILLSNTCREAAAMVG 246

Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454
           ER+R   +  +   A+G  I L++S+G +        E L++ AD ALY+AKR GRNR+E
Sbjct: 247 ERLRFAAQSEEY-LADGHRILLTVSLGCSTLLPGESAESLLRRADSALYVAKREGRNRLE 305

Query: 455 L 455
           +
Sbjct: 306 M 306