Pairwise Alignments

Query, 360 a.a., Uncharacterized ABC transporter ATP-binding protein YcjV from Escherichia coli ECOR38

Subject, 356 a.a., ATP-binding component of sn-glycerol 3-phosphate transport system (VIMSS) from Escherichia coli BW25113

 Score =  330 bits (845), Expect = 5e-95
 Identities = 175/357 (49%), Positives = 238/357 (66%), Gaps = 7/357 (1%)

Query: 1   MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGD 60
           MA L LQ + K +D +  V+K   L++AD EFIV VGPSGCGKST LRM+AGLE ++ GD
Sbjct: 1   MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGD 60

Query: 61  LLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQ 120
           + I+ +R+ ++  K R IAMVFQNYALYPHM+V +NMA+GLK++ + K+ I ERV  AA+
Sbjct: 61  IWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAAR 120

Query: 121 ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL 180
           IL L   LKR+P  LSGGQRQRVA+GRAIVR+  VFL DEPLSNLDAKLRVQMR E+ +L
Sbjct: 121 ILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQL 180

Query: 181 HQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVAGFIGSPAM 240
           H++L TT +YVTHDQ EAMT+A R+++M  G+ +Q+G P  VY +PA++FVA FIGSPAM
Sbjct: 181 HRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAM 240

Query: 241 NFIRGTI--DGDKFVTETLKLTIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDAQEENNI 298
           N + G +  +G  F  +   + +P         ++   + + +GIRPE I   +Q E  +
Sbjct: 241 NLLTGRVNNEGTHFELDG-GIELPLNG----GYRQYAGRKMTLGIRPEHIALSSQAEGGV 295

Query: 299 SAKISVAELTGAEFMLYTTVGGHELVVRAGALNDYHAGENITIHFDMTKCHFFDAET 355
              +   E+ GA+ + +   G  +LVVR        AG  + +H    + H FD ET
Sbjct: 296 PMVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAENQLHLFDGET 352