Pairwise Alignments

Query, 360 a.a., Uncharacterized ABC transporter ATP-binding protein YcjV from Escherichia coli ECOR38

Subject, 361 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  337 bits (863), Expect = 4e-97
 Identities = 181/359 (50%), Positives = 243/359 (67%), Gaps = 4/359 (1%)

Query: 1   MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGD 60
           MA+LSL+++ K Y   + V+   NLE+ D EF+VFVGPSGCGKST LRMIAGLE+ISGGD
Sbjct: 1   MAELSLKNVVKRY-GALEVIHGANLEVEDGEFVVFVGPSGCGKSTLLRMIAGLEDISGGD 59

Query: 61  LLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQ 120
           ++I GK ++D     R IAMVFQ+YALYPHMTV +N++FGL+M    K    +RV+ AA+
Sbjct: 60  IVIGGKTVSDADPADRGIAMVFQSYALYPHMTVAENLSFGLRMNGNPKADTQKRVSRAAE 119

Query: 121 ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL 180
           IL + E ++R+P  LSGGQRQRVA+GRAIVRE  VFL DEPLSNLDA+LRVQMR EIS+L
Sbjct: 120 ILQINELMQRRPKQLSGGQRQRVAIGRAIVREPKVFLFDEPLSNLDAELRVQMRVEISRL 179

Query: 181 HQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVAGFIGSPAM 240
           H++L TTMIYVTHDQTEAMT+A +IV+++ G ++QVGAP  +Y+ PAN FVAGF+GSP M
Sbjct: 180 HKQLGTTMIYVTHDQTEAMTLADKIVVLRAGNIEQVGAPLDLYDDPANRFVAGFVGSPKM 239

Query: 241 NFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQESLHK--PIVMGIRPEDIHPDAQEENNI 298
           NF+  TI G    + TL L         L  +E +++   + +GIRPE        + ++
Sbjct: 240 NFLEATIIGTGAESITLSLDSDPAVRLTLPIKERINEGAKVSLGIRPEHFADAGAGDADL 299

Query: 299 SAKISVAELTGAEFMLYTTV-GGHELVVRAGALNDYHAGENITIHFDMTKCHFFDAETE 356
           +  + VAE  G    +Y    GG +L++      D    + +T+     K   FD++ E
Sbjct: 300 TVHVDVAEHLGNTSYVYARAQGGEQLIIERPESRDVGNRDKLTVGLSAHKAFLFDSKGE 358