Pairwise Alignments

Query, 882 a.a., Autotransporter adhesin AidA from Escherichia coli ECOR38

Subject, 825 a.a., Outer membrane autotransporter from Pseudomonas putida KT2440

 Score =  112 bits (281), Expect = 7e-29
 Identities = 145/571 (25%), Positives = 236/571 (41%), Gaps = 94/571 (16%)

Query: 359 NNIKGHLAIDASNSKITGSANLSTDDSTHTYLSLSDNSTWDIKTDSTVSKLTVDNSTVYI 418
           N+  G LA+DAS S+IT    + T  +     ++S+  T D         LT  N  +  
Sbjct: 302 NSSTGSLALDAS-SRITSRQGVITAFAPGQRAAISNAGTLD---------LTAGNDAM-- 349

Query: 419 SRADGKAFEPTRLTITENYVGNNGVLHLRTELGDDNSATDKVVIN-GNTSGTTRVKVTNA 477
                      RL I  +Y GNNG L L + L  D +A+D++V++ G  +G+T+V + N 
Sbjct: 350 ----------GRLRIEGDYTGNNGTLRLNSVLAGDGAASDRLVVSRGAIAGSTQVLINNL 399

Query: 478 GGSGAYTL-NGIEIISVEGESNG---EFIKDSRIFAGAYEYSLTRGNTEATNKN-WYL-T 531
            G+GA T  NGI+++     +      F++  R+ AGAY+Y L +G   A ++N WYL +
Sbjct: 400 NGAGAATAQNGIQVVEARNGATSTATAFVQTQRLSAGAYDYRLFKGGVTAGSENSWYLRS 459

Query: 532 NFQATSGGETNSGGSSAPTVAPT------------------------PVLRSEAGSYVAN 567
              A             P +AP                         P+ R E   Y A 
Sbjct: 460 TLVAPPAPAPVPAPGEPPVIAPAVTPPVAAPAPGQAELPAPVQGQSLPLYRPEVPVYAA- 518

Query: 568 LAAANTLFVMRLNDRAGETRYIDPVTEQERSS--RLWLRQIGG--HNAWRDSNGQLRTTS 623
            A      + R        R  D +  Q  S+    W +  GG     W  +        
Sbjct: 519 -APRGAAIIARQALGTFHQRQGDQLLLQGESALPASWGQAYGGTLRQQWSGTVSP-SLDG 576

Query: 624 HRYVSQLGAELLTGGFTDSDSWRLGVMAGYAR---DYNSTHSSVSDYRSKGSVR--GYSA 678
             Y  ++G +L      +     +G+   ++R   D      +V D RS G ++  G S 
Sbjct: 577 DLYGFKVGQDLYAKVGDNGYRQHVGIYVSHSRLDADVKGFALAVHD-RSVGDLKLDGDSV 635

Query: 679 GLYATWFADDISKKGAYIDAWAQYSWF---KNSVKGDELAYESYSAKGATVSLEAGYGFA 735
           G Y T     +  +GAY+DA  QY+       S +GD L  + ++    T SLE+GY   
Sbjct: 636 GTYWTL----VGPQGAYLDAVLQYTRLDGRARSERGDTLNLDGHA---WTASLESGYPIT 688

Query: 736 LNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTEANGSRIENDANNNFQTRLGFRTFIRT 795
           L++          W  +PQAQ I   V   +  + + SRI +DA      RLG    +R 
Sbjct: 689 LSE---------RWRVEPQAQLIAQKVALESARD-SVSRISHDAQVELTGRLG----LRL 734

Query: 796 QEKNSGPHGDDFEPFVEMNWIH--NSKDFAVSMNGVKVEQDGARNLGEIKLGVNGNLNPS 853
           +   +G  G   +PF ++N  H    +D     +  K++ D      +++ GV   +N +
Sbjct: 735 EGAFTGSSGRLLQPFAQVNLWHGDGGRDTLTFDDADKIKTDYRYTSVQLESGVVAQVNEA 794

Query: 854 ASVWGNV--GVQLGDNGYNDTAMMVGLKYKF 882
            S+ G V     L       + + +G++++F
Sbjct: 795 LSLHGGVQYTANLDSRQQEASGVNLGVRWQF 825



 Score = 26.2 bits (56), Expect = 0.009
 Identities = 78/338 (23%), Positives = 127/338 (37%), Gaps = 73/338 (21%)

Query: 202 KAKLDMAKGEITTHGTESYAAYANGTVVKAGSKLDYTNASVTLTDVDITTHGDN-----A 256
           + +L +  G +   G  S AA+A  T         YT  S T   + + + GDN     A
Sbjct: 7   RLRLMLTLGSLPLLGMASPAAHAACTFSPGPGNDTYTCDSGTAPAL-VDSSGDNRLVFPA 65

Query: 257 HAIAARQGTVSFNQGEIHTTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGI--------VL 308
               A  G V+F  G+      D A   +  GG V         +QGAGI        V+
Sbjct: 66  SGSGAITGDVTFGAGK---DSIDMASGSV--GGNV---------NQGAGIDDFVMSGGVI 111

Query: 309 ESSIN-GQEATVDILSGSSLR----SANEILYNKNETSNVTI-------------TDSEV 350
           E ++N G       +SG  ++    S +    +     NV +              D  V
Sbjct: 112 EGNLNQGDGLDTFHMSGGWIKGTFDSGDYAEMDDGRIGNVNMRLDENTFIMRGGSVDRNV 171

Query: 351 SSAAD-----VFINNIKGHLAIDASNSKIT-------GSANLSTDDSTHTYLSLSDNSTW 398
            +A D     VF  NI G++++   + ++        G   LST +   T+         
Sbjct: 172 ITAFDKDYIEVFEGNIGGNISVSGGDDQVLVHGGQVGGDVLLSTGNDRFTWDGGRIGGRV 231

Query: 399 DIKT--DSTVSK-LTVDNSTVYISRADGK---AFEPTRLTITENYVG------NNG---V 443
           D     D+ + K LT +  ++ +   +G     F+ ++     +YV       NNG    
Sbjct: 232 DAGPGDDTALLKGLTPEVLSITLDGGEGNDSLTFDASQPAGGAHYVNWERVALNNGSRLA 291

Query: 444 LHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSG 481
           L     LGD NS+T  + ++ ++  T+R  V  A   G
Sbjct: 292 LDDTLVLGDSNSSTGSLALDASSRITSRQGVITAFAPG 329