Pairwise Alignments
Query, 882 a.a., Autotransporter adhesin AidA from Escherichia coli ECOR38
Subject, 1239 a.a., AIDA autotransporter-like protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Score = 231 bits (588), Expect = 3e-64
Identities = 226/889 (25%), Positives = 366/889 (41%), Gaps = 119/889 (13%)
Query: 45 DIDNALVITTGNGSYGVSVAGEGSNLTINKGVIVTTGGLYPSGNSPLSTVYTASAVVSEY 104
D+D+ L G+ G S+ EG+ G ++ +G SG + ++ +A +
Sbjct: 419 DVDDTL--DPGSRWDGKSLTKEGA------GTLILSGDNDYSGGTTINEGTLVAASTTAL 470
Query: 105 GGAVILQGNNTIVTTGDYSIGLLS--QTNGNLNTDTIIRVNTDGSVNPHLSYEGNTFIVT 162
G ++ N T+V D + + T+ T + + D + + +G+T V
Sbjct: 471 GTGLV-DNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDGSTLNVE 529
Query: 163 AGNHAVGVLACASPGSARACVSSLDEESTADTGSNENNAKAKLDMAKGEITTHGTESYAA 222
+ +V L S + + D A E + +DM T +
Sbjct: 530 LNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFKLMDM---------TSDISG 580
Query: 223 YANGTVVKAGSKLDYTNASVTLTDVDITTH------GDNAHAIAARQGTVSFNQGEIHTT 276
+ K DY + T+ D + + NA A +A +F G +
Sbjct: 581 DFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF 640
Query: 277 GPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSLRSANEILYN 336
+ + G K+ + + GAG + S N ++ G+ S + +
Sbjct: 641 EVTSVLGDKTGNGDWDGKSLTKL---GAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGE 697
Query: 337 KNETSNVTITDSEVSSAADVFINNIKGHLAIDASNSKITGSANLSTDDSTHTYLSLSDNS 396
V + ++ N K+T L +S T + N
Sbjct: 698 MGSQQAVNVASGATFGGSNG-----------TTVNGKVTNEGTLVFGNSEETGAIFTLNG 746
Query: 397 TW-DIKTDSTVSKLTVDNSTVYISRADGKAFEPTRLTITENYVGNNGVLHLRTELGDDNS 455
++ T ++ S + +T+Y+ DG NY GN G L+L T LGDD+S
Sbjct: 747 DLINMGTMTSGSSSSTPGNTLYV---DG------------NYTGNGGSLYLNTVLGDDDS 791
Query: 456 ATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGE-FIKDSRIFAGAYEY 514
ATDK+VI G+ SGTT + + N G GA T NGIE++ V G S + F + + AG Y Y
Sbjct: 792 ATDKLVITGDASGTTDLYI-NGIGDGAQTTNGIEVVDVGGVSTSDAFELKNEVNAGLYTY 850
Query: 515 SLTRGNTEATNKNWYLTNFQAT----SGGET--NSGGSSAPTVAP--------------- 553
L ++ +WYL + + SGG+ + GG V P
Sbjct: 851 RLYWNESD---NDWYLASKAQSDDDDSGGDDTPSDGGDDGGNVTPPDDGGDGGNVTPPDD 907
Query: 554 ----------------TPVLRSEAGSYVANLAAANTLFVMRLNDRAGETRYIDPVTEQER 597
P R++ G+Y+ N A L + L DR G ++Y +
Sbjct: 908 GGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREG-SQY------RNA 960
Query: 598 SSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRLGVMAGYAR-D 656
+W R G +G + S+ QLG ++L G S +GVMA Y D
Sbjct: 961 DGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWG-NGQQSVTVGVMASYINAD 1019
Query: 657 YNSTHSSVSD---YRSKGSVRGYSAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDE 713
+ST + +D + S G+V GY+ G+YATWFAD + GAY+D+W QY ++ NSV+ +
Sbjct: 1020 TDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGD 1079
Query: 714 LAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTEANGS 773
ESY + VSLE GY + + S G T PQAQ +W ++ + G+
Sbjct: 1080 AGSESYDSTANAVSLETGYRYDIALSNG-----NTVSLTPQAQVVWQNYSADSVKDNYGT 1134
Query: 774 RIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQ 833
RI+ +++ TRLG +R K +PF E NW+H S D +VS + V+Q
Sbjct: 1135 RIDGQDGDSWTTRLG----LRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQ 1190
Query: 834 DGARNLGEIKLGVNGNLNPSASVWGNVGVQLGDNGYNDTAMMVGLKYKF 882
D N E+K+G+ +++ SV V Q G N + D + L+Y +
Sbjct: 1191 DLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW 1239
Score = 45.4 bits (106), Expect = 2e-08
Identities = 116/487 (23%), Positives = 185/487 (37%), Gaps = 69/487 (14%)
Query: 34 HAVAIKDGEVKDIDNALVITTGNGSYGVSVAGEGSNLTINKGVIVTTG-GLYPSGNSPLS 92
HA ++ G V N+ V+ G G +++G GS + G + +G Y G + +
Sbjct: 47 HADSLGTGAVA---NSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTTIIG 103
Query: 93 TVYTASAVVSEYGGAVILQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNT-DGSVNPH 151
TA S GAV N+ ++ G+ G L T + ++++ T + +++
Sbjct: 104 GTLTADHADSLGTGAV---ANSGVLQVGE---GELENTLS--GSGSLVKTGTGELTLSGD 155
Query: 152 LSYEGNTFIV---TAGNHA--VGVLACASPGSARACVSSLDEE-----STADTGSNENNA 201
SY G T I+ +HA +G A A+ G + L+ S TG+ E
Sbjct: 156 NSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTL 215
Query: 202 KAKLDMAKGEITTHGT---ESYAAYANGTVVKAGSKLDYTNASVTLTDVDITTHGDNAHA 258
+ T GT + A +G + +G+ + N + L +V TTH A
Sbjct: 216 GGDNSYSGATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANV--TTHSGATTA 273
Query: 259 IAARQ--GTVSFNQGEIHTTGPDAAIA---KIYNGGKVTLKNTSAVAHQGAGIVLESSIN 313
+AA F Q + T D A + V L T V G G V +S
Sbjct: 274 LAAGSTLDAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVT--GIGSVTDSWTP 331
Query: 314 GQEATVDILSGSSLRSANEIL----YNKNETSNVTITDSEVSSAADVFINNIKGHLAIDA 369
I S S++ + + L N+ + +TI D +V A + H + A
Sbjct: 332 EAYTYTLIGSDSAITTDFDDLTVAGMNREDVDFLTI-DGKVDEADNT-------HYDLTA 383
Query: 370 SNSKITGSANLSTDDSTHTYLSLSDNSTWDIKTDSTVSKLTVDNSTVYISRADGKAFEPT 429
S S N +TD H +LSD D + + VD++ SR DGK
Sbjct: 384 SLSWYADRDNATTD--AHGTFTLSDP---DGSFNVAATLTDVDDTLDPGSRWDGK----- 433
Query: 430 RLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIE 489
++T+ G L DN + IN GT T A G+G N
Sbjct: 434 --SLTKEGAGT-------LILSGDNDYSGGTTIN---EGTLVAASTTALGTGLVDNNATL 481
Query: 490 IISVEGE 496
++ +GE
Sbjct: 482 VLDADGE 488