Pairwise Alignments

Query, 882 a.a., Autotransporter adhesin AidA from Escherichia coli ECOR38

Subject, 1192 a.a., autotransporting virulence factor family member from Agrobacterium fabrum C58

 Score =  154 bits (390), Expect = 2e-41
 Identities = 232/910 (25%), Positives = 360/910 (39%), Gaps = 163/910 (17%)

Query: 65   GEGSNLTINKGVI--VTTGGLYPSGNSPLSTVYTASAVVSEYGGAVILQGNNT------- 115
            G GS   I+ G +  +   GLY    +P  +++ +    +  GG   +  +N        
Sbjct: 354  GSGSTRIISSGDVTAIVRAGLYAYNAAPADSIFVSQTSGTVKGGTYGVFADNAGTGSTTV 413

Query: 116  -----IVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPHLSYEGNTFIVTAGNHAVGV 170
                 ++ +GDY +      N +  TD ++R  T GS+       G T I+ A N   G 
Sbjct: 414  TLSGDVIASGDYGV---YSRNASSATDLMVR-QTAGSI------AGRTGIL-ASNRGTGA 462

Query: 171  LACASPGSARACVSSLDEESTADTGSNENNAKAKLDMAKGEITTHGTESYAAYANGTVVK 230
             +  S GS  +  +    ++ A  GS        +D+A     T    S  A  +G V  
Sbjct: 463  -SLVSVGSRVSGGAGAGIQTIAANGST-------IDIASSATVT--ATSGIAIRDGGVAG 512

Query: 231  AGSKLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEIHTTGPDAAIAKIYNGGK 290
            +    D    +V +    I T GD    +    G  +FN       G       IY   +
Sbjct: 513  SPIASDTIGGNVVVNSAGIVT-GDAVLGL----GDDTFNLAGGTYAG------NIYGDDR 561

Query: 291  VTLKNTSAVA-HQG------AGIVLESSINGQEATVDILSGSSLRSANEILYNKNETS-- 341
               ++   V  H+G       G  L     GQ+ +   +  +S    +++L   ++TS  
Sbjct: 562  DDPRSNDGVTNHEGNDTFTWTGGTLAGGFYGQDGSDTAMVSASAYDGSQVLDGGDDTSVA 621

Query: 342  -----NVTITDSEVSSAADVFIN----NIKGHLAIDASNSKITGSANLSTDDSTHTYLSL 392
                  +T+     ++     IN    N+ G     AS S   G  ++   D   T + L
Sbjct: 622  DGMIDTLTLKGVTATTNGGKIINWEVVNLDG-----ASLSIDDGVWHVGEPDEATTGVFL 676

Query: 393  SDNSTWD-IKTDSTVSKLTVDNSTVYISRADGK---------AFEPTRLTITE------- 435
             + S  D I + +    +T+D+++ ++    G          A   T  T+ +       
Sbjct: 677  DNRSRLDGIASLAFDGNMTIDSTSAFVGTGGGTGVYSFSGDVANAGTITTVDDAVGDVVI 736

Query: 436  ---NYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIIS 492
               NY GN G +     LGDDNS TD V+ING+TSG T V V N GG+GA T  GI II 
Sbjct: 737  IGGNYNGNGGQILFDVALGDDNSKTDMVIINGDTSGMTNVGVNNVGGTGAQTSEGIRIIE 796

Query: 493  VEGESNGEF-------IKDSR-IFAGAYEYSLTRGNTEATNK-NWYLTNFQATSGGETNS 543
            V G SNG F       I D + + AGAY Y L +G T + N  NWYL + Q T    T  
Sbjct: 797  VNGASNGYFSLVGDYTIGDRQAVVAGAYAYQLYQGGTSSPNDGNWYLRS-QLTVSNPT-- 853

Query: 544  GGSSAPTVAPTPVLRSEAGSYVANLAAANTL-FVMRLNDRAGE-----------TRYIDP 591
                 PT    P+ ++   SY A   A   L  V  L  R G            T Y  P
Sbjct: 854  -----PT---APLYQAGVPSYEAYPQALLGLNGVPTLQQRVGSRFWAGNGASVGTPYATP 905

Query: 592  --VTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGAELLTGGFTDSDSWRL-- 647
                     + +W R  G HN              + V +L A  + G  T+++S +L  
Sbjct: 906  EGAGVAIEGNGVWGRIEGVHNHIEPRFSAAAAEYDQNVFKLQAG-IDGLLTETESGKLIG 964

Query: 648  GVMAGYARDYNSTHSSVSDYRSKGSVRGYSAGLYATWFADDISKKGAYIDAWAQYSWFK- 706
            G    YA     T S   D   + S  GY  G   TW+ ++    G Y+D  AQ +W+  
Sbjct: 965  GFTVHYAHGKTDTRSVWGD--GEISTDGYGLGGTLTWYGEN----GFYLDGQAQMTWYTS 1018

Query: 707  --NSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDH 764
              NS+       ++    G T+SLE+G   A++           W   PQAQ ++  VD 
Sbjct: 1019 GLNSLLARTNLTDNNDGFGYTLSLESGTRIAIDPG---------WSVTPQAQLVYSNVDF 1069

Query: 765  NAHTEANGSRIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKD-FA 823
            +A T+  G+R+  D   + Q RLG      T +  S    D  +  +  + ++   + + 
Sbjct: 1070 DAFTDTFGARVSLDRGESLQGRLGV-----TLDHESAWQND--KGLLNRSHVYGIGNLYY 1122

Query: 824  VSMNGVKVEQDGARNLGE-----IKLGVNGNL---NPSASVWGNVGVQLGDNGYNDTAMM 875
              + G +V+  G R           LG+ G     +   S++G   VQ   N + D+  +
Sbjct: 1123 EFLEGTRVDVQGVRLASRNDRVWAGLGLGGTYSWDDDKYSIYGEALVQTSLNDFGDSYSV 1182

Query: 876  ---VGLKYKF 882
               VGL+ K+
Sbjct: 1183 KGQVGLRVKW 1192



 Score = 35.8 bits (81), Expect = 2e-05
 Identities = 73/331 (22%), Positives = 125/331 (37%), Gaps = 44/331 (13%)

Query: 275 TTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSLRSANEIL 334
           +T  +A   +   G  +T  N S++   G   +L  +IN     V+I S  S+   + I 
Sbjct: 125 STSGEAIRVETIGGIAITDGNASSITSSGGQGIL--AINDVSGAVEITSNGSITGIDGIY 182

Query: 335 YNKNETSNVTITDSEVSSAA---DVFINN--IKGHLAIDASNSKITGSAN-LSTDDSTHT 388
                T   TIT S  +       V+++N      L +  +   I G+ N +ST +    
Sbjct: 183 VINTGTGPTTITSSGTAIGTIGNGVYVSNDGFATDLTVSQTGGTIFGADNGISTTNRGFG 242

Query: 389 YLSLSDNSTWDIKTDSTVSKLTVDNST-VYISRADGKAFEP-TRLTITENY------VGN 440
             ++S     D   ++ +      N+T + I++A G      T     +N+      +  
Sbjct: 243 ATAISVAGDVDGAAENGIWAQNFANATGITITQAVGSTITGYTHGIRADNWAAGAISITT 302

Query: 441 NGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGG-----SGAYTLNGIEIISVEG 495
            GV++ +T+ G  N+ T  V    +T+GT  +    AG       G Y  N       +G
Sbjct: 303 AGVIN-QTQTGAANNDTFGVYAYNSTAGTDIILTQTAGSISGNWFGMYANN-------QG 354

Query: 496 ESNGEFIKDSRIF----AGAYEY------SLTRGNTEATNKNWYLTNFQATSGGETNSGG 545
             +   I    +     AG Y Y      S+    T  T K      F   +G      G
Sbjct: 355 SGSTRIISSGDVTAIVRAGLYAYNAAPADSIFVSQTSGTVKGGTYGVFADNAG-----TG 409

Query: 546 SSAPTVAPTPVLRSEAGSYVANLAAANTLFV 576
           S+  T++   +   + G Y  N ++A  L V
Sbjct: 410 STTVTLSGDVIASGDYGVYSRNASSATDLMV 440