Pairwise Alignments

Query, 251 a.a., flagellar basal-body rod protein FlgF from Escherichia coli ECOR38

Subject, 246 a.a., Flagellar basal-body rod protein FlgF from Pseudomonas fluorescens GW456-L13

 Score =  173 bits (438), Expect = 3e-48
 Identities = 99/252 (39%), Positives = 140/252 (55%), Gaps = 7/252 (2%)

Query: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS 60
           +D  +Y AM  ASQ    Q   A+NLAN ST GF+  L   R++PV G S P R    + 
Sbjct: 1   VDKYLYVAMTGASQNALAQKAHANNLANISTNGFQKDLEQARSMPVFGDSFPARAFAMSE 60

Query: 61  TPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADSSEGYTRNGSIQVDPTGQLTI-QGHP 119
            P  D +PG +  T R LDVA+Q +GW+AVQ  D  E Y R GS+ VD  G L    G P
Sbjct: 61  RPATDFSPGSLVETGRDLDVAVQGNGWIAVQNPDGGESYVRTGSLNVDALGVLRAGNGMP 120

Query: 120 VIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIF 179
           V+G  GPI+VP   +I +  DGTIS    G+    +A V R+KLV      + +G DG  
Sbjct: 121 VMGNGGPISVPPEQQIEVGEDGTISIRAMGEGPRVMAEVDRIKLVNPDFKNMTKGLDG-- 178

Query: 180 RLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDD 239
                     G   QAD  ++++SG LE SNVNAV  M+ ++A A++FE+ +K++++  D
Sbjct: 179 ----SIHTKDGAPAQADADVKLVSGFLESSNVNAVEEMTSVLALAKQFELHIKMMNTAKD 234

Query: 240 NAGRANQLLSMS 251
           +     ++L +S
Sbjct: 235 DDQAMARVLQIS 246