Pairwise Alignments

Query, 600 a.a., NADH-quinone oxidoreductase subunit C/D from Escherichia coli ECOR38

Subject, 594 a.a., NADH:ubiquinone oxidoreductase from Pseudomonas simiae WCS417

 Score =  954 bits (2467), Expect = 0.0
 Identities = 440/580 (75%), Positives = 514/580 (88%), Gaps = 2/580 (0%)

Query: 22  DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMD 81
           D  V+ EL NRFGPDAFT QATRTG+PV+W+ R +L+EV  FL+ LPKPYVML+DLHG+D
Sbjct: 16  DQDVVVELNNRFGPDAFTAQATRTGMPVLWVARAKLVEVLTFLRNLPKPYVMLYDLHGVD 75

Query: 82  ERLRTHREGLPA-ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 140
           ERLRT R+GLP+ ADF+VFYHL+S++RN D+M+KVAL+E+DL +PT T+++PNA+WYERE
Sbjct: 76  ERLRTKRQGLPSGADFTVFYHLMSLERNSDVMIKVALSESDLSIPTVTRIWPNASWYERE 135

Query: 141 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 200
            WD+FGI F GHP+L RIMMP TW+GHPLRKD+PARATEF PF L  AKQ LE EA  F+
Sbjct: 136 VWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARATEFDPFSLNLAKQQLEEEAARFR 195

Query: 201 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 260
           PE+WGMKR   NED+MFLNLGPNHPSAHGAFRI+LQLDGEEIVDCVPDIGYHHRGAEKM 
Sbjct: 196 PEDWGMKRSGTNEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMA 255

Query: 261 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 320
           ERQSWHS+IPYTDRI+YLGG +N +PYVL+VEKLAGI VPDRV+ IR+M++E FRI SHL
Sbjct: 256 ERQSWHSFIPYTDRIDYLGGVMNNLPYVLSVEKLAGIKVPDRVDTIRIMMAEFFRITSHL 315

Query: 321 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 380
           L++ T+IQDVGAMTPVFF FTDRQ+ Y ++EAITGFR+HPAW+RIGGVAHDLP GWDRL+
Sbjct: 316 LFLGTYIQDVGAMTPVFFTFTDRQRAYKVIEAITGFRLHPAWYRIGGVAHDLPNGWDRLV 375

Query: 381 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 440
           +EF+DWMPKRL  Y+KAAL N+ILKGR+ GVA Y  KEALEWG TGAGLR+TG DFD+RK
Sbjct: 376 KEFIDWMPKRLDEYQKAALDNSILKGRTIGVAQYNTKEALEWGVTGAGLRSTGCDFDLRK 435

Query: 441 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 500
           ARPYSGYENF+FE+P+     D Y R +++VEE+RQSL+I+EQC+ NMP GP+KADHPLT
Sbjct: 436 ARPYSGYENFEFEVPLAAN-GDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLT 494

Query: 501 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 560
           TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG TMSYRTR
Sbjct: 495 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTR 554

Query: 561 IRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 600
           IRTPS+AHLQQIP+ I+G +V+DLI YLGSIDFVM+DVDR
Sbjct: 555 IRTPSFAHLQQIPSVIKGEMVADLIAYLGSIDFVMADVDR 594