Pairwise Alignments

Query, 285 a.a., Uncharacterized HTH-type transcriptional regulator YpdC from Escherichia coli ECOR38

Subject, 283 a.a., AraC family putative transcriptional activator from Escherichia coli BL21

 Score =  151 bits (382), Expect = 1e-41
 Identities = 94/270 (34%), Positives = 144/270 (53%), Gaps = 8/270 (2%)

Query: 16  LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRMVEGEM 75
           L S L+  P  L +++FAS    +P  +  +DFPRL+IVL GE+ +        +V G++
Sbjct: 8   LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDV 65

Query: 76  LFIPARAANLPINNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE--G 133
           L++ A   N P    P    S++F    LG S          + A+Q      +RG   G
Sbjct: 66  LYVAAGGWNFPQWKTPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ---HVARRGPRIG 122

Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRNVVNMPPGNSQPRGDFLYHSICNWVQDN 193
             +L  L  +   P EQ   + +V SLL  CR+++      +  R   L+ +I +++ + 
Sbjct: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTAS-RSQALFEAIRDYIDER 181

Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253
           YA  LTRESVAQ F I+PN+LS LF + G + F EY+   R+  A+ +L+ Y L + EVA
Sbjct: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241

Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283
             CGF DS+YFCR+FR+    +P EY  ++
Sbjct: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQY 271