Pairwise Alignments

Query, 336 a.a., cytoskeleton protein RodZ from Escherichia coli ECOR38

Subject, 327 a.a., Cro/Cl family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  130 bits (327), Expect = 5e-35
 Identities = 108/324 (33%), Positives = 156/324 (48%), Gaps = 26/324 (8%)

Query: 16  GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEE---DKAPADLASTFLRGYIRSYARLV 72
           G  LR ARE  G S   VA +L L  +++ ++E    DK P     TF RGYIR+YA+L+
Sbjct: 17  GDTLRQARESNGWSLAEVALKLNLTTTSLGNLEAGAFDKLPGH---TFARGYIRAYAKLL 73

Query: 73  HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132
            I +  L+   ++     +          + +  +     L   + L+L  VIG  G  W
Sbjct: 74  GIDQAILVQEFDQFTGTDSQGSNVHGLGRIEEPVRVSHTILRIVSLLLLIAVIG-GGFVW 132

Query: 133 WQDHKAQQ-EEITTMA-DQSSAELNNNQSQSVPLDTSTTTDQAMATTPTSPVDTTATNT- 189
           WQD  +Q+ +++T+ A +    E  +  +Q  PLD     DQA+A     P    AT   
Sbjct: 133 WQDQASQRTKDLTSNAMEHVEVESADGTTQIHPLDEPE--DQAVAEGQALPEAPVATEQP 190

Query: 190 ---QTPAATTAPSPTVDSQQNAVVPPSQANVDTAATPAPAATTTPDGAAPLPTDQAGVTT 246
              +T  A TA +PT  +    V     A V   ATPAPAA   P  + P        T 
Sbjct: 191 AAPETAPAATAAAPTPATPAAPVAQTPAAPVQAPATPAPAAPVAPAISPP--------TA 242

Query: 247 PAV--DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 304
           PA+      + + F ADCW +VTD  GK LFSG++RK   L+  G+ P  L++G     Q
Sbjct: 243 PALIAGDGRVQITFIADCWTQVTDGNGKVLFSGLKRKGDTLDQGGKPPLTLRLGFARGAQ 302

Query: 305 IQYQGKPVDLSRFIRTNQVARLTL 328
           + Y G+PVD++ F  T + ARL L
Sbjct: 303 VAYNGQPVDVAPF-TTGETARLKL 325