Pairwise Alignments

Query, 336 a.a., cytoskeleton protein RodZ from Escherichia coli ECOR38

Subject, 334 a.a., FIG021952: putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  544 bits (1401), Expect = e-159
 Identities = 282/339 (83%), Positives = 295/339 (87%), Gaps = 8/339 (2%)

Query: 1   MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60
           MNTEATHDQNEA TTG RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAP+DLASTF
Sbjct: 1   MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTF 60

Query: 61  LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120
           LRGYIRSYARLVH+PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLM+FTWLV
Sbjct: 61  LRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLV 120

Query: 121 LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELN--NNQSQSVPLDTSTTTDQAMATTP 178
           LFVV+GL+GAWWWQ+HKAQQEEITTMADQS+AELN   +  QSVPLDT   T Q   TTP
Sbjct: 121 LFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTGAATSQ--DTTP 178

Query: 179 TSPVDTTATNTQTPAATTAPSPTVDSQQNAVVPPSQANVDTAAT-PAPAATTTPDGAAPL 237
                  AT   + AAT  P+PT  + QN VV PSQANVDTAAT  APAAT TP   + L
Sbjct: 179 AQTAPAPATPVDSTAATQTPAPTAAATQNTVVAPSQANVDTAATSAAPAATETP---SAL 235

Query: 238 PTDQAGVTTPAVDPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 297
           PT QAGV  PA DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI
Sbjct: 236 PTSQAGVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 295

Query: 298 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 336
           GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE +PAQ
Sbjct: 296 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEPTPAQ 334