Pairwise Alignments

Query, 326 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Escherichia coli ECOR38

Subject, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Dickeya dadantii 3937

 Score =  572 bits (1474), Expect = e-168
 Identities = 279/325 (85%), Positives = 302/325 (92%)

Query: 1   MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL 60
           M+Q+VQLTATV+E+QLGQRLDQALAE+FPDYSRSRIK WIL+QRV +NGK+ DKPKEKVL
Sbjct: 1   MSQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKTWILEQRVQINGKMVDKPKEKVL 60

Query: 61  GGEQVAINAEIEEEARFEPQDIPLDIVYEDDDIIVINKPRDLVVHPGAGNPDGTVLNALL 120
           GGE VAI+A IEE+AR+E Q I LDIVYED+DI+VINKPRDLVVHPGAGNPDGTVLNALL
Sbjct: 61  GGESVAIDALIEEDARWEAQPISLDIVYEDEDILVINKPRDLVVHPGAGNPDGTVLNALL 120

Query: 121 HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT 180
           H+YP I DVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQ REITREYEAVAIG MT
Sbjct: 121 HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQAREITREYEAVAIGTMT 180

Query: 181 AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM 240
           AGGTV+EPI+RH TKRTHMAVHPMGKPAVTHYRIMEHFR HTRLRLRLETGRTHQIRVHM
Sbjct: 181 AGGTVEEPIARHSTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM 240

Query: 241 AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP 300
           AHI HPLVGDP+YGGRPR PKGASEAFI TLR FDRQALHATMLRLYHPISGIEMEWHAP
Sbjct: 241 AHINHPLVGDPLYGGRPRLPKGASEAFIETLRNFDRQALHATMLRLYHPISGIEMEWHAP 300

Query: 301 IPQDMVELIEVMRADFEEHKDEVDW 325
           +PQDMVELI  ++AD +  KD++DW
Sbjct: 301 LPQDMVELIAALKADTDAFKDQLDW 325