Pairwise Alignments

Query, 272 a.a., IS3 family transposase from Escherichia coli ECOR38

Subject, 268 a.a., putative transposase for IS3 from Escherichia coli BL21

 Score =  195 bits (495), Expect = 1e-54
 Identities = 106/262 (40%), Positives = 149/262 (56%), Gaps = 2/262 (0%)

Query: 7   VSRSGYYNWVQHEP--SDRKQSDERLKLEIQVAHIRTRETYGTRRLQTELAENGIIVGRD 64
           V+RSG+Y W Q     S R+Q  +     +  A  R+++ YG  RL  EL   G      
Sbjct: 4   VARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVK 63

Query: 65  RLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFTPTAPNQVWVADLTYVATQE 124
            +A   +   LR K  RKF   +   H LPV+ NLL Q F  + PNQ W  D+TY+ T E
Sbjct: 64  TVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDE 123

Query: 125 GWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAY 184
           GWLYLA + D+++  ++G++M  RMT +L   AL MAL  ++ P  +I H+DRG QYC+ 
Sbjct: 124 GWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSA 183

Query: 185 DYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEI 244
           DY+   ++  L+ SMS KG CYDNA +ESF+ +LK E +    F +R+   + +  YIE 
Sbjct: 184 DYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIEC 243

Query: 245 FYNRQRRHSRLGNISPAAFREK 266
            YNR RRHS  G +SP  F  +
Sbjct: 244 DYNRWRRHSWCGGLSPEQFENQ 265