Pairwise Alignments

Query, 272 a.a., IS3 family transposase from Escherichia coli ECOR38

Subject, 271 a.a., putative transposase for IS3 from Escherichia coli BL21

 Score =  203 bits (516), Expect = 4e-57
 Identities = 110/268 (41%), Positives = 153/268 (57%), Gaps = 2/268 (0%)

Query: 1   MCQVFGVSRSGYYNWVQHEP--SDRKQSDERLKLEIQVAHIRTRETYGTRRLQTELAENG 58
           MC+V  V+RSG+Y W Q     S R+Q  +     +  A  R+++ YG  RL  EL   G
Sbjct: 1   MCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQG 60

Query: 59  IIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFTPTAPNQVWVADLT 118
                  +A   +   LR K  RKF   +   H LPV+ NLL Q F  + PNQ W  D+T
Sbjct: 61  YPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDIT 120

Query: 119 YVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRG 178
           Y+ T EGWLYLA + D+++  ++G++M  RMT +L   AL MAL  ++ P  +I H+DRG
Sbjct: 121 YLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRG 180

Query: 179 SQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVI 238
            QYC+ DY+   ++  L+ SMS KG CYDNA +ESF+ +LK E +    F +R+   + +
Sbjct: 181 GQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATV 240

Query: 239 REYIEIFYNRQRRHSRLGNISPAAFREK 266
             YIE  YNR RRHS  G +SP  F  K
Sbjct: 241 FNYIECDYNRWRRHSWCGGLSPEQFENK 268