Pairwise Alignments

Query, 272 a.a., IS3 family transposase from Escherichia coli ECOR38

Subject, 286 a.a., transposase from Agrobacterium fabrum C58

 Score =  205 bits (521), Expect = 1e-57
 Identities = 107/267 (40%), Positives = 159/267 (59%), Gaps = 3/267 (1%)

Query: 1   MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIQVAHIRTRETYGTRRLQTELAENGII 60
           +C+  GVSRSG++ W    PS+  + DE L   I+ +   +  TYG RR+  ++ E G+ 
Sbjct: 18  LCEALGVSRSGFHAWFNRSPSEHARHDEVLLERIKQSFQSSDRTYGARRVWHDVLEEGLS 77

Query: 61  VGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVA-PNLLNQTFTPTAPNQVWVADLTY 119
            G  R+ RL +   LR + +R  R       + PV  PN+L++ F    PNQ WVAD TY
Sbjct: 78  CGLHRIERLMRLNALRARPRR--RGFPKDAGDRPVVMPNVLDRQFVADRPNQKWVADFTY 135

Query: 120 VATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGS 179
           + T EGWLY+A + D+++  +VG++M   MT +L   AL MA+  +  P  L+HHSD+GS
Sbjct: 136 IWTAEGWLYVAAVIDLFSRRVVGWSMNANMTAQLVTDALIMAIWRRGKPDALLHHSDQGS 195

Query: 180 QYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIR 239
           QY +  ++ +    G+  SMSR GN +DNA MESF+ +LK E  +   +  R++A + + 
Sbjct: 196 QYTSEQFQRLMGDHGITCSMSRSGNVWDNAAMESFFSSLKTERTARKVYRTRNDARADVF 255

Query: 240 EYIEIFYNRQRRHSRLGNISPAAFREK 266
           +YIE FYN +RRHS LG +SP  F  K
Sbjct: 256 DYIERFYNPKRRHSTLGYLSPDDFETK 282