Pairwise Alignments

Query, 372 a.a., hydrogenase 2 small subunit from Escherichia coli ECOR38

Subject, 333 a.a., Uptake hydrogenase small subunit precursor (EC 1.12.99.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  112 bits (279), Expect = 2e-29
 Identities = 83/280 (29%), Positives = 136/280 (48%), Gaps = 33/280 (11%)

Query: 51  VIWIGAQECTGCTESLLRATHPTVENLVLET-ISLEYHEVLSAAFGHQVEENKHNALEKY 109
           V+W+ +  C GC+ SLL A     +  + +  ++L +H  LS   G ++ +     L+  
Sbjct: 5   VLWLQSGGCGGCSMSLLCADTTDFQGHLRDAGVNLLWHPSLSMESGDELLDLLDAVLDGR 64

Query: 110 KGQYVLVVDGSIPLKDNGI--YCMVAGE--PIVDHIRKAAEGAAAIIAIGSCSAWGGVAA 165
                L V+GS+    NG   + M+AG   P+++ +++ +  A  ++A+GSC+AWGG+ A
Sbjct: 65  TRLDALCVEGSLLRGPNGTGRFHMLAGTQLPMIEWVKRLSARAKHVLAVGSCAAWGGITA 124

Query: 166 AGVNPTGAVSLQ--------------EVLPGKTVINIPGCPPNPHNFLATVAHII--TYG 209
            G NPT A  LQ                  G  VINI GCP +P   + T+  +   ++G
Sbjct: 125 GGDNPTDACGLQYEDDEAGGLLGAAFRSASGLPVINIAGCPTHPSWVIDTLMALAADSFG 184

Query: 210 KPPKLDDKNRPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETY 269
              +LD  NRP F   +L+H  C R  +++    A++  D     G  + H+GCKG + +
Sbjct: 185 -AGELDPLNRPRFYADQLVHHGCTRNEYYEFKASAEKPSD----LGCMMEHMGCKGTQVH 239

Query: 270 GNCSTLQF-----CDVGGVWPVAIGHPCYGCNEEGIGFHK 304
            +C+T  +     C  GG   +A   P  G  E G  FH+
Sbjct: 240 ADCNTRLWNGEGSCTRGGYACIACTEP--GFQEPGHPFHE 277