Pairwise Alignments

Query, 296 a.a., sugar ABC transporter from Escherichia coli ECOR38

Subject, 313 a.a., transcriptional regulator from Escherichia coli ECRC101

 Score =  161 bits (408), Expect = 2e-44
 Identities = 104/295 (35%), Positives = 161/295 (54%), Gaps = 15/295 (5%)

Query: 4   IKLLGSAMLVSLALFSQSSLAKEYK-IGASLLTQQHPFYIDLANAMKEEAKK---DNVNL 59
           +  L +  L++ A F+Q   AKE K IG ++    +PF++ +    + EA+K   DNV +
Sbjct: 7   VTALCAGALLAAAPFAQ---AKELKSIGVTVGDLANPFFVQITKGAELEARKLAGDNVKV 63

Query: 60  SVSIANQDLNKQLSDVEDFITKKVDAIIISPVDSKGVQAAIIKADKAGIPVITVDVAAEG 119
           ++  +  DL +Q+S +++FI   VD II++  DSKG+  A+ +A  AGI V+ VDVAAEG
Sbjct: 64  TLVSSGYDLGQQVSQIDNFIAANVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVAAEG 123

Query: 120 VPVVSHVATDNYAGGVEAGKLMGKLLNGKGTVAIISYPALQSVVARVDGFKKGLSETPDI 179
                 + +DN   G  A K +   L GKG V II+ P + +V  RV+G +      PDI
Sbjct: 124 ADAT--ITSDNTQAGEMACKYITDRLKGKGNVVIINGPPVSAVQNRVEGCQTEFKRHPDI 181

Query: 180 KIVAEQPGI--TRAEALTTAQNIMQANANLNGLFGFGDDAALAAVIAAKSAHNDNIKIIG 237
           K++++      +R   L     ++ AN  ++G+F   D  A+ A +AAK A  +   I+G
Sbjct: 182 KVLSDNQNAKGSREGGLEVMTGLLAANPKIDGVFAINDPTAIGADLAAKQAQRNEFFIVG 241

Query: 238 FDGMKEARDAVDSEKT-FAAVIRQYPDQMGAKAIDAAVDHLNGKPVEK---MIPV 288
            DG  +A +A+  E + F A   Q P  M AKA++   D L GKP  K   +IPV
Sbjct: 242 VDGSPDAEEALKRENSLFVATPAQDPQVMAAKAVEIGYDILQGKPAPKEPVLIPV 296