Pairwise Alignments

Query, 300 a.a., dipeptide ABC transporter permease DppC from Escherichia coli ECOR38

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  269 bits (688), Expect = 5e-77
 Identities = 133/276 (48%), Positives = 186/276 (67%), Gaps = 6/276 (2%)

Query: 23  WHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAE-QFRDALLAPPAWQEGGSMAHLL 81
           W  F  N+ A++GLV ++ +LF+A+FA+ +AP+NP +   R+A L PP     G+  +LL
Sbjct: 36  WRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPP-----GTAGYLL 90

Query: 82  GTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIM 141
           GTDD GRD+LSRL++G+RL+L V  LV +++  +G+I+G ++GY GG VD I+MR+ DI 
Sbjct: 91  GTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIF 150

Query: 142 LALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGA 201
           LA P L+LAL LVA  GP I NA LA+   + P Y R+ RA  +   N D++ A ++ GA
Sbjct: 151 LAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGA 210

Query: 202 GAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQF 261
              R +  ++ P CL+ LIV+ +L  +  IL  A LGFLG+GAQPP PEWG M++   +F
Sbjct: 211 SPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRF 270

Query: 262 AQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPK 297
               WWV   PG+AIL+  L FNL+GDGLRDALDPK
Sbjct: 271 ILDQWWVAAMPGIAILIVSLGFNLLGDGLRDALDPK 306