Pairwise Alignments

Query, 330 a.a., ribose operon transcriptional repressor RbsR from Escherichia coli ECOR38

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  266 bits (681), Expect = 4e-76
 Identities = 141/334 (42%), Positives = 216/334 (64%), Gaps = 5/334 (1%)

Query: 1   LATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH 60
           +AT+KDVA  A VS +TVSHV+N  R VS  +  +VE AI+EL Y P+A+ARSLK N T 
Sbjct: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60

Query: 61  TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL 120
           T+GMLI  S+NP+++E+VR VE  CF  GY+LVLCNT+ +  R +  L+ L ++R+DGL+
Sbjct: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120

Query: 121 LLCTETHQPSREIMQRYP-TVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTR 179
           ++ T T      + Q +   VPTV++D    D   DL++   + GG LA ++L+  GH R
Sbjct: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180

Query: 180 IACITGPLDKTPARLRLEGYRAAMKRAGL--NIPDGYEV--TGDFEFNGGFDAMRQLLSH 235
           IACI G     P+  R+EG+R A+  AG   +I +G  +   G F   GG++AM  +L  
Sbjct: 181 IACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240

Query: 236 PLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDE 295
             +P AVF  ND MA+G  +A +++ ++VP D++++G+DDIEL+++ +PPLTT+ QPK+ 
Sbjct: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300

Query: 296 LGELAIDVLIHRITQPTLQQQRLQLTPILMERGS 329
           +G +A+D+L+ ++       +++ L P L  R S
Sbjct: 301 IGAMAVDMLLEQMGGKRRDARKVVLQPELRVRAS 334