Pairwise Alignments

Query, 1259 a.a., autotransporter assembly complex protein TamB from Escherichia coli ECOR38

Subject, 1224 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  376 bits (965), Expect = e-108
 Identities = 351/1307 (26%), Positives = 591/1307 (45%), Gaps = 140/1307 (10%)

Query: 5    KKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRW----VPGLDI----GKVTGGWR 56
            K   L VV ++ +LL ++  ++GT +G         RW    VPGL +    G + G W 
Sbjct: 6    KIAGLAVVAILAVLLLALWAVLGTQAG--------SRWALGRVPGLTLENFQGHLGGQW- 56

Query: 57   DLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQV 116
              +   V ++Q    V+           CL   ++CI  L ++ +     S + PPS   
Sbjct: 57   --SADHVLWQQDSSRVELKAPTFDWSPACLLRMTLCIETLDVEQV-----SLQFPPST-- 107

Query: 117  EEEEDSGPL---DLSTPYPITLTRVA---------------------------LDNVNIK 146
              EE SGP+   DL  P  I L  V                            +D+V+++
Sbjct: 108  --EESSGPIQLPDLKLPLAIQLGDVRVGSLLFNGSEELKGLQLAAHWTAAGLQIDSVHLQ 165

Query: 147  IDDTTVSVMDFTSGL----NWQEKTLTLKPTSLKGLLIALPKVAEAAQEEVVEPKIENPQ 202
             DD    V+D T  L    +W        P +  G L +LP     A  +V   K++   
Sbjct: 166  RDDL---VLDLTGLLQPTGDW--------PLNATGNL-SLPYAPGGASWKVAL-KVDGD- 211

Query: 203  PDEKPLGETLK-DLFSRPVLP-EMTDVHLPLNLNIEEFKGEQLRVTGDTDITVRTMLLKV 260
                 L +TLK D  S   LP ++T    PL  N+      QL +T D            
Sbjct: 212  -----LLKTLKLDADSTGYLPAKLTGELQPLVENLPA----QLHITADG-------FKPS 255

Query: 261  SSIDGNTKLDALDIDSSQGIVNAS----GTAQL-SDNWPVDITLNSTLNVEPLKGEKVKL 315
            + +    +L+ LD+ +++G +N      G A L ++  PVD+ L   ++ +  +   + L
Sbjct: 256  ADLPDTLQLNQLDL-TAKGDLNRGYQLLGKAVLPAEKGPVDLLLQGRVDAKGAQIAGLDL 314

Query: 316  KVGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNSKQLYWPFTDEKLYQADD 375
              G   ++ L++   L  P      A  ++     P +      +LY P  DE       
Sbjct: 315  NAGD--KQSLKLTAQLDWP--QGFSADAKIDWLDFPWH------RLY-PVIDEPQVALRT 363

Query: 376  LKLKLTGKMTDYTLSMRTAVKGQEIPPAT--ITLDAKGNEQQVNLDKLTVAALEGKTELK 433
               +++ K  +Y  +++  + G   P  T  +     G+ +Q+ L +L + A +GK E  
Sbjct: 364  FNGEISYKDGNYLGNLKADLDG---PAGTFNVVTPFSGDLKQIFLPELKLTAGQGKAEGH 420

Query: 434  TLLDWQQAISWRGELTLNGIDTAKEFPEWPSKLNGLIKTRGSLYGGTWQMEVPELKLTGN 493
              L +   I+W   L L+ ++ A    E P  L G ++++G       ++   +L L G 
Sbjct: 421  LNLQFADGITWDTALDLSALNPAYWVAELPGTLAGPLRSKGEFKNEQLKLNA-DLDLKGR 479

Query: 494  VKQNKVNVDGTLKGNSYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNAL 553
            ++     +    +G    QW +  L + LG N     G L  + L     I    L    
Sbjct: 480  LRGQTAVLAAKAEGAGE-QWTLANLDIRLGDNRINGSGSLQQR-LAGQIDIKLARLAQLW 537

Query: 554  PGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELSVAQVRVEGDIKSTDQIAGKLDVR 613
            P L G   G + V G+++APQ   D+  + L + +  +  + +   + +  +   K+D++
Sbjct: 538  PQLRGQVNGRLDVAGSLKAPQGKLDLKGQQLAFADNRLQSLTLAATLDNAQR--AKIDLK 595

Query: 614  VEQISQPDVSINLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNT 673
               I   D  +  +T +A+G  K  ++QL + G  V   L L G+ D+    W+G L++ 
Sbjct: 596  GSSIQSGDTQVGTLTASAQGDIKNQKVQLDLAGPLVKLALALDGNLDKGN--WRGRLASG 653

Query: 674  RFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTINAGAEGRAVVNLNR 733
              Q     W L     ++ R  + K++   HCW++  A LC  +      E +   +L +
Sbjct: 654  DVQAGGQDWKLQAPAKIE-RMADGKLTFAAHCWVSGPASLC-GEDQRLMPEPKLRYHLKQ 711

Query: 734  FDLAMLKPFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPV 793
            F +  L  F+P+     G  T  ADV  D    G P+G + +      +     D  L  
Sbjct: 712  FPIDSLAAFLPKDFAWQG--TLNADVQLDLPDSG-PKGVVAVDASGGTLRVRDKDQWLDF 768

Query: 794  AFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGGNVNIRNFNLAMIN 853
             + TL L   L   R +     R    G+   Q Q+      + + GN ++   +LA+  
Sbjct: 769  PYDTLKLETTLNPKRIDTQLNFRGGKLGELMVQAQINPLPKNKPITGNFSLVGLDLAVAR 828

Query: 854  PIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGM 913
            P     E  +G ++ N R+ G + +PQ+ G + + G +I G  +P  +Q   +     G 
Sbjct: 829  PFVPMVETLSGKLNGNGRIAGGLLAPQVNGNVNLVGGEISGPELPISLQGLNVQAVIAGE 888

Query: 914  RSTLAGTVRT-QQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFE 972
               L G  R+ + G+  L G  +W Q       ++ +GS++ +TV P   ++V+PD+   
Sbjct: 889  SVQLNGGWRSGKAGQGSLKGQIEWGQA--LAVDLSLQGSQLPVTVEPYAVLEVAPDLKIS 946

Query: 973  ATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEAKTASIPINSNLIV 1032
               +   + G+V +P   I V +LP S V VS D V++    Q EE K          +V
Sbjct: 947  LKNDKLAVAGKVHIPRGDITVRELPPSTVKVSDDTVIIGS--QTEEGKPPMAMAMDIDVV 1004

Query: 1033 HVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGELLFS 1092
               + +    FGL A++ G +++  +   L   G++ + +GR+ AYGQ L VR+  LLF+
Sbjct: 1005 VGEDKLNFSGFGLTAKVQGQVHIGDN---LDTRGELWLNDGRYRAYGQKLDVRRARLLFA 1061

Query: 1093 GPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSYLLRGQG 1152
            GP DQPYL+IEAIR  D    DVIAG+R++G A++P  +IFS+PAMSQ+ ALSYL+ G+ 
Sbjct: 1062 GPLDQPYLDIEAIRKTD----DVIAGIRLSGSAEQPTTQIFSEPAMSQEQALSYLVLGRP 1117

Query: 1153 LESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQVVVSGYVLP 1212
            L +   D+  +    +GLG+  S  +   + +  G+ +  LDTQG G+++ VV SG +  
Sbjct: 1118 LSTTGEDNNMLAQAALGLGLMGSAGVTSDLAKNLGIQDFELDTQGSGNNTAVVASGKITE 1177

Query: 1213 GLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF 1259
             L ++YGVG+F+  +T+ LRY L  K+YLE  SGV  +LD+ Y+ +F
Sbjct: 1178 KLSLRYGVGVFEPASTIALRYLLSKKVYLEVASGVASSLDIFYKRDF 1224