Pairwise Alignments

Query, 1259 a.a., autotransporter assembly complex protein TamB from Escherichia coli ECOR38

Subject, 1224 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score =  404 bits (1038), Expect = e-116
 Identities = 347/1276 (27%), Positives = 595/1276 (46%), Gaps = 97/1276 (7%)

Query: 18   LLGSVAFLVGTTSGLHLVFKAADRWV----PGLDI----GKVTGGWRDLTLSDVRYEQPG 69
            LLG VA  VG   GL L  +A  RWV    PGL++    G++ G W+    S + +   G
Sbjct: 12   LLGGVAS-VGLVLGLLLGTQAGSRWVLGKVPGLEVADFQGRLAGSWQ---ASRLTWADGG 67

Query: 70   VAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEEEDSGPLDLST 129
              V+     LA    CL  +++CI+ L        ID    P +E  E    S PL L T
Sbjct: 68   STVEMQAPLLAWSPACLLRATLCIDQLQAD----RIDMAFAPSTEPTE----SAPLQLPT 119

Query: 130  ---PYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGLLIALPKVA 186
               P  I L  V +  + +   D    + D     +W    + +    L    + L    
Sbjct: 120  LRLPLAIELGEVKVGQLRLDGSDL---LGDLHLAAHWTNSGIRIDSLRLLRDDLQLSLQG 176

Query: 187  EAAQEE----VVEPKIENPQPDEKP--LGETLKDLFSRPV-LPEMTDVHLPLNLNIE-EF 238
            +   E      ++ +++ P  DEKP  L  T      + + L   +  +L   L+ + + 
Sbjct: 177  DLQPEGDWPVKLQAQLQLPAVDEKPWQLALTANGQLQKTLELAGTSSGYLDATLSGQLQA 236

Query: 239  KGEQLRVTGDTDITVRTMLLK-VSSIDGNTKLDALDIDSSQGIVNA---SGTAQL-SDNW 293
              E L  T    + +R+   K   ++    +L+AL++D+   +++    SG A+L ++  
Sbjct: 237  LAEHLPAT----LHIRSEAFKPAGALPDTLQLNALELDAKGDLLHGYKLSGKARLPAEQS 292

Query: 294  PVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVN----LSGPVDMDLRAQTRLAEAG 349
            P+ + L+  ++ +  + + + L    + R +L+   +    LS    +D +    L    
Sbjct: 293  PIALLLSGLVDSKGARLDALDLTASDSQRVKLQATADWQQGLSADAQLDWQDFPWLRLYP 352

Query: 350  LPLNVEVNSKQLYWPFTDEKLYQADDLKLKLTGKMTDYTLSMRTAVKGQEIPPATITLDA 409
            +    EV  K+    F  +  Y+  + +   TG +     +             +I    
Sbjct: 353  METPPEVTLKR----FNTQVHYRDGNYQGTFTGDLDGPAGAF------------SIASPF 396

Query: 410  KGNEQQVNLDKLTVAALEGKTELKTLLDWQQAISWRGELTLNGIDTAKEFPEWPSKLNGL 469
            +G+  QV L +L + A +GK      + +   ++W  +L L+ +D A    E P  L G 
Sbjct: 397  EGDLTQVKLPQLALTAGQGKAAGSVAVRFADTLAWDVDLQLSALDPAYWLAELPGTLAGP 456

Query: 470  IKTRGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGLHLELGPNSAEV 529
            ++++G L G    ++  +L L G ++     +    +G     W +  L ++LG N    
Sbjct: 457  LRSKGELKGDVLTLDA-QLDLKGRLRGQPAMLKAETQGAG-QNWTLGTLAIQLGDNRING 514

Query: 530  KGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQEL 589
             G L  + L     ++ P L    P L G  KG + V GT++APQ    +T +G R  + 
Sbjct: 515  SGSLQQR-LAGRIDLDLPRLGQLWPRLQGRVKGRLDVAGTLQAPQ--GTLTLQGQRLAQA 571

Query: 590  SVAQVRVEGDIKSTDQIAGKLDVRVEQISQPDVSINLVTLNAKGSEKQHELQLRIQGEPV 649
                 +++ D +  +   G ++++   I   D ++  +  N KG  +Q  L L + G  +
Sbjct: 572  ENRLQQLDLDARLDNAQRGVVELKATGIHLGDTALGTLQANGKGDIRQQALTLALDGPQL 631

Query: 650  SGQLNLAGSFDRKEERWKGTLSNTRFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNP 709
               L L G  ++ +  W+G L+  R Q     W L     L  R    ++  G HCW + 
Sbjct: 632  KLDLGLDGQLNKGD--WRGRLATGRIQAGGQEWQLQAPARLQ-RLASGQLDFGAHCWRSG 688

Query: 710  NAELCVPQTINAGAEGRAVVNLNRFDLAMLKPFMPETTQASGIFTGKADVAWDTTKEGLP 769
             A LC         E R   +L +F L  L  ++P+     G+    AD+  D    G P
Sbjct: 689  QASLCGDDQ-RLAPEPRLRYHLKQFPLGSLAQWLPKDFAWQGLLN--ADINLDIPASG-P 744

Query: 770  QGSITLSGRNVQVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQV 829
            +G++ +      +        +   +Q L L + L   R +     RL   G+  G++ V
Sbjct: 745  KGTVVVDASGGTLRVRDKGRWIDFPYQALRLDSTLAPRRIDT----RLAFRGERLGELNV 800

Query: 830  T---DPQGRRN-LGGNVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQL 885
                DP G+   L G+  +   +L++  P     E+ AG ++ + RL G + +PQ+ G L
Sbjct: 801  NARLDPLGKNKPLSGDFRLAGLDLSVARPFVPMVERLAGQLNGSGRLSGTLLAPQVNGNL 860

Query: 886  QVTGVDIDGNFMPFDMQPSQLAVNFNGMRSTLAGTVRT-QQGEIYLNGDADWSQIENWRA 944
             ++G ++ G  +P  +Q   L     G +  L G  R+ + G   L+G+  W Q      
Sbjct: 861  MLSGGEVSGAELPASLQDLSLQALIAGEQVQLNGNWRSGEAGRGQLSGNLTWGQALGMDV 920

Query: 945  RVTAKGSKVRITVPPMVRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDLPESAVGVS 1004
            R+  +G ++ + V P   ++V+PD+      +   + G+V VP  +I V +LP S V VS
Sbjct: 921  RL--QGQQLPVAVEPYATLEVAPDLTLRLIDDKLAVTGKVQVPKGKITVRELPPSTVKVS 978

Query: 1005 SDVVMLNDNLQPEEAKTASIPINSNLIVHVGNN-VRIDAFGLKARLTGDLNVVQDKQGLG 1063
             D V++    Q EE K   + +  ++ V VG + +    FGL A L G +++  +   L 
Sbjct: 979  DDTVIVGH--QTEEGKPP-MAMAMDIDVEVGRDKLSFSGFGLTANLLGHVHIGDN---LD 1032

Query: 1064 LNGQINIPEGRFHAYGQDLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTG 1123
              G++++ +GR+ AYGQ L +R+  LLF+GP DQPYL+IEAIR  D    DVIAG+R++G
Sbjct: 1033 TRGELSLADGRYRAYGQRLTIRRARLLFAGPIDQPYLDIEAIRKVD----DVIAGIRLSG 1088

Query: 1124 LADEPKAEIFSDPAMSQQAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIG 1183
             A++P  ++FS+PAMSQ+ ALSYL+ G+ L +   D+  +    +GLG+A S  I G + 
Sbjct: 1089 SAEQPTTKVFSEPAMSQEQALSYLVLGRPLGNTGEDNNMLAEAALGLGLAGSAGITGSLA 1148

Query: 1184 ETFGVSNLALDTQGVGDSSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEA 1243
             + G+ +  LDT+G G+S+ VV SG +   L ++YGVG+F+   T+ LRY+L  K+YLEA
Sbjct: 1149 SSLGIDDFQLDTEGSGNSTSVVASGNITEKLSLRYGVGVFEPANTIALRYKLSKKVYLEA 1208

Query: 1244 VSGVDQALDLLYQFEF 1259
             SG+  +LD+ Y+ +F
Sbjct: 1209 ASGLASSLDIFYKRDF 1224