Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI methylase subunit from Escherichia coli ECOR38

Subject, 519 a.a., Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 92.0 bits (227), Expect = 4e-23
 Identities = 115/440 (26%), Positives = 190/440 (43%), Gaps = 57/440 (12%)

Query: 80  EFVNDDLFPALKNLTAPIDKNPRGYVVKQAFSD---AYNYMKN-----GTLLRQVINKLN 131
           E +N DL    K + A     P    +K  F+D     N + N      + L  V+  + 
Sbjct: 102 ESLNTDLANIFKAIEASASGYPSEQDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKGVA 161

Query: 132 EIDFTSASERH--LFGDIYEQILKDLQS-AGNAG-EFYTPRAVTRFMVDRVDPKLGES-- 185
           E+DF      H  LFGD YE ++ +  + AG +G EF+TP+ V++ +        G++  
Sbjct: 162 ELDFGGFDANHIDLFGDAYEFLISNYAANAGKSGGEFFTPQQVSKLIAKLA--MYGQTSI 219

Query: 186 --IMDPACGTGGFLACAFDHVKNKYVKSVADHQTLQQQIHGVEKKQLPHLLATTNMLLHG 243
             I DPACG+G  L  A         K   D   ++    G E     + LA  NM LH 
Sbjct: 220 NKIYDPACGSGSLLLQA---------KKQFDDHLIEDGFFGQEINHTTYNLARMNMFLHN 270

Query: 244 IEVP-VQIRHDNTLNKPLSSWDEQLDVIVTNPPFG----GTEEDGI---EKNFPAE-MQT 294
           +      I+  NTL +P  +     D IV+NPP+     G+++  +   E+  PA  +  
Sbjct: 271 VNYDKFSIQLGNTLEEPHFADGRPFDAIVSNPPYSVKWIGSDDPTLINDERFAPAGVLAP 330

Query: 295 RETADL-FLQLIVEVLAKNGRAAVVLPDGTLFGEGVKTKIKKLLTEECNLHTIVRLPNGV 353
           +  AD  F+   +  L+  GRAA+V   G  +  G + KI+K L +   + +++ L + +
Sbjct: 331 KSKADFAFVLHALNYLSAKGRAAIVCFPGIFYRGGAEQKIRKYLVDNNYVESVISLASNL 390

Query: 354 FNPYTGIKTNLLFFTKGQPTKEIWFYEHPYPAGV----KNYSKTKPMKFEEFQAEIDWWG 409
           F   T I  N+L  +K +      F +    +G+     N +       ++  A  D   
Sbjct: 391 FFG-TTIAVNILVLSKHKKDTVTQFID---ASGLFKKETNNNALLDKHIDDIMAVFDRKA 446

Query: 410 NEADGFASRVENEQAWKVSIDDVIARNFNLDIKNPHQAETVSH--DPDELLAQYAKQQAE 467
           N  + FA  V  EQ        V A ++NL + +   A+      D  +L A+     ++
Sbjct: 447 N-VEHFAKSVPLEQ--------VAANDYNLSVSSYVDAKDSREVVDIAKLNAELKTTVSK 497

Query: 468 IQTLRNQLRDILGAALSGKE 487
           I  LR  + D + A + G+E
Sbjct: 498 IDLLRRDI-DAIVADIEGEE 516