Pairwise Alignments

Query, 328 a.a., LacI family transcriptional regulator from Escherichia coli ECOR38

Subject, 319 a.a., Ribose import binding protein RbsB from Pseudomonas lactucae CFBP13502

 Score = 80.5 bits (197), Expect = 5e-20
 Identities = 85/314 (27%), Positives = 136/314 (43%), Gaps = 37/314 (11%)

Query: 2   MNKRFVINMVSSLLLGAALISAPLQ-------AAEKVVVNISKVDGMPWFNRMGEGVVEA 54
           M   F   +++  +L AA  + PL        AA+  V  + K     +F  M EG  + 
Sbjct: 1   MKLPFAGRLLAVAVLAAASAALPLSSAFADDAAAKPKVGLVMKSLANEFFVTMQEGAKDY 60

Query: 55  GKAFGVNASQVG---PSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAG 111
            K+   +   +     + TD   Q+ I+  +I  KVNAI I P D+  L  V KKA DAG
Sbjct: 61  QKSHAADFDMITNGIKNETDTSAQIDIVNQMILSKVNAIVIAPADSKALVTVLKKASDAG 120

Query: 112 IVVLTNESPGQP----SANWDIEII--DNEKFAAEYVEHMAKRM--GGKGGYVIYVGSLT 163
           I V+  ++   P    S   DI  +  DN K A    +++AK++  G K G +  V + T
Sbjct: 121 IKVVNIDNRLDPDVLKSKKLDIPFVGPDNRKGAKLVGDYLAKQLAAGDKVGIIEGVPTTT 180

Query: 164 VPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAE-----SVDDSRRTTLDLMKTYPDLKAV 218
             Q           +   + D  +      V+       +D  ++    ++  YPDLKA+
Sbjct: 181 NAQQ----------RTAGFKDAMDAAGMKIVSTQSGNWEIDQGQKVASAMLSEYPDLKAL 230

Query: 219 VSFGSNGPIGAGRAVKEKRAKNKVAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALA 278
           ++   N  +GA  AV+      KV V G         ++K G +    T D A+A  A+ 
Sbjct: 231 LAGNDNMALGAVSAVRAAGKAGKVLVVGYDNIEAIKPMLKDGRVL--ATADQAAAQQAVF 288

Query: 279 AV--ASTLLKGEEI 290
            +  A  L+KGE++
Sbjct: 289 GIQNALKLVKGEKV 302