Pairwise Alignments

Query, 318 a.a., sugar ABC transporter permease from Escherichia coli ECOR38

Subject, 327 a.a., Ribose transport system permease protein rbsC from Escherichia coli BL21

 Score =  166 bits (420), Expect = 7e-46
 Identities = 93/292 (31%), Positives = 166/292 (56%), Gaps = 7/292 (2%)

Query: 17  LVLTVAAFSITMPEIFWSISNFQSVASQMPVLGILALAMAVTMLCGGINLSIIATANACS 76
           L++ V  FS + P  F++  N  ++A Q  V+GI+A+ +   ++  GI+LS+ +      
Sbjct: 31  LIILVLFFSFSSP-FFFNTENIMTIALQTSVIGIMAIGVTFVIITAGIDLSLGSVVAFSG 89

Query: 77  LVMAWVATQYPPGIATVVATLLAGAGAAVIIGLCNGVLIAGIRVSPILATLGMMTLLKGV 136
           + +   AT   P    ++A +LAG     + G  NG+L+  + + P +ATLG+M  ++G+
Sbjct: 90  VAVGICATLGLPLPVCIIAGVLAGG----MCGYVNGLLVTKMTIPPFIATLGLMMSVRGI 145

Query: 137 NILVTGGSAI--ANYPSWVLWLNHAQWFGIPLPMWLFTAVALGLWILLEKTPLGKAIYLI 194
           N+++T G AI  A+YP +        +  +P P++    VAL    +L+KT +G+ +Y +
Sbjct: 146 NMVMTDGRAIYFADYPMFKTLAQGRLFDVLPYPVFYLVIVALVGAYILKKTVIGRYVYAV 205

Query: 195 GSNERATLYSGINTRRVLIWVYVISALLCAVAAFLMMSKLNSAKASYGESYLLVSILAAV 254
           GSNE A   SGI  +RV I+VY    LL  +A  ++ S+LNS + + G  Y L +I A V
Sbjct: 206 GSNEVAAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNSGQPTVGVGYELEAIAAVV 265

Query: 255 LGGVNPDGGSGRIIGMVLALFLLQIIESGFNILGISPYLTMALWGTLLLCFI 306
           +GG +  GG G I G ++  F++ ++++G N++G+S +  M   G +++  +
Sbjct: 266 IGGTSLMGGIGTIGGTIIGAFIMSVLKNGLNLMGVSQFWQMVAMGVVVVAAV 317