Pairwise Alignments

Query, 289 a.a., DNA-binding transcriptional regulator HexR from Escherichia coli ECOR38

Subject, 288 a.a., HTH-type transcriptional regulator HexR from Pseudomonas sp. DMC3

 Score =  229 bits (583), Expect = 7e-65
 Identities = 125/288 (43%), Positives = 177/288 (61%)

Query: 1   MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT 60
           +N+L+ I      L KSE KVA+ +L  P   +HSS+A LA    +SEPT+ RFCR++  
Sbjct: 1   LNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC 60

Query: 61  RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR 120
            GF D KL LAQSLA G  +    ++EDDSV  Y+ KIF++ + TL  VR  LD   + R
Sbjct: 61  SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREKLDPVELQR 120

Query: 121 AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV 180
           AV L++QA+++ F+G G+S AVA DA +KFFR  +      D  +Q MS +     DV +
Sbjct: 121 AVTLMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAI 180

Query: 181 LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR 240
            IS +GR+K+L+  A L RE+ A +I L  + TPLA  +T+ + +DV EDT+IY P+ SR
Sbjct: 181 CISQSGRSKDLLITANLVRESGASLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR 240

Query: 241 LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDD 288
           +A L VIDVLA G  + RG    ++LK VK +L+  R   + +   DD
Sbjct: 241 IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKAVKALDD 288