Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECOR38

Subject, 344 a.a., membrane protein from Magnetospirillum magneticum AMB-1

 Score =  156 bits (394), Expect = 7e-43
 Identities = 102/315 (32%), Positives = 163/315 (51%), Gaps = 56/315 (17%)

Query: 9   IVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLAT 68
           I++KR K  + GA  G+WK+AYADF+TAMMAFFL++WL++  + ++L  ++ YF   +A+
Sbjct: 8   IIIKRVKKVAGGAHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVSNYFAPTMAS 67

Query: 69  -------------AVTGGDRISNSESP----------IPGGGDDYTQS------------ 93
                         +  G ++SN+ SP          I  GG+D T S            
Sbjct: 68  KSSSGAGGLLGGKVIGEGAQVSNTSSPSLVQHLPPASIGPGGEDLTGSKEFAPENEGDSS 127

Query: 94  --------QGEVN-----------KQPNIEELKKRMEQSRLRKLRGDLDQLIESDPKLRA 134
                   QGE              +   +E + + EQ +  K +  L+  ++  P+++ 
Sbjct: 128 LGPGKGAGQGEGQGAGQGKDRSGMSEQEFKEAQAQREQQKFDKAKEVLEGAMKGIPEMKQ 187

Query: 135 LRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIP-NCISLS 193
            +  + +D   EGLRIQI D +   MF +GS+    + R +L  ++ V+  +P N I++S
Sbjct: 188 FQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPYGHTRAMLDLVSRVVRQLPDNRIAIS 247

Query: 194 GHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVGMAATMRLSDRGPD 253
           GHTD  P+     GY+NWELSADRA A+RR L+  G+  G++ R+VG A    L    P 
Sbjct: 248 GHTDAIPFRD-PSGYTNWELSADRALATRRALIASGVPEGRIDRIVGRADQEPLDKADPK 306

Query: 254 DAVNRRISLLVLNKH 268
              NRRIS+++L ++
Sbjct: 307 GLRNRRISIILLREN 321