Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECOR38

Subject, 211 a.a., putative lateral flagellar export/assembly protein LafU from Escherichia coli ECRC100

 Score =  110 bits (274), Expect = 4e-29
 Identities = 65/181 (35%), Positives = 102/181 (56%), Gaps = 6/181 (3%)

Query: 120 GDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAI 179
           G+L   I +  +   +  +L++++V +GLR+ I D QNR MF  GSA + P+ + +L  +
Sbjct: 30  GELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVEL 89

Query: 180 APVLNGIPNCISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVV 239
           APV + + N I ++GHTD   Y +    Y+NW LS DRA ++RR L   G+   KV++V 
Sbjct: 90  APVFDSLDNKIIITGHTDAMAYKNNI--YNNWNLSGDRALSARRVLEEAGMPEDKVMQVS 147

Query: 240 GMAATMRLSDRGPDDAVNRRISLLVLNKHAEQAILH---ENAESQNEP-VSALEKPEVAP 295
            MA  M L  + P  A NRRI ++VL K A   +     ++ +   +P V  L+K +V  
Sbjct: 148 AMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLS 207

Query: 296 Q 296
           Q
Sbjct: 208 Q 208