Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECOR38

Subject, 378 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  114 bits (285), Expect = 4e-30
 Identities = 61/157 (38%), Positives = 95/157 (60%), Gaps = 1/157 (0%)

Query: 111 EQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEP 170
           E  + ++   ++ Q I+S P+L  L  +L ID   EGLRIQI+D     MF  GS  + P
Sbjct: 202 EARQFQQAATEIRQAIQSVPELEPLAQNLMIDQTPEGLRIQIVDQDRVSMFPGGSGQMYP 261

Query: 171 YMRDILRAIAPVLNGIPNCISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGL 230
             R +++ +A  L+ +PN +S+SGHTD  P+ +G  G  NW+LS +RANA+RR L+ GG+
Sbjct: 262 QTRQLVQQVAKALSKLPNKLSISGHTDSSPFPAG-SGRDNWDLSTERANATRRALLAGGI 320

Query: 231 NGGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267
           +  ++  VVG A    L    P+   NRRI++++L +
Sbjct: 321 DPTRIQDVVGKADRDPLVADQPNSPRNRRIAMVLLRE 357



 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 28/55 (50%), Positives = 44/55 (80%), Gaps = 2/55 (3%)

Query: 9  IVVKRRKAKSHGAAHG-SWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYF 62
          I++K++K   HG  HG +WK+AYADF+TAMMAFFL++WL+++++  +   IA+YF
Sbjct: 12 IIIKKKKG-GHGGHHGGAWKVAYADFVTAMMAFFLLLWLLNVTTSDQRKGIADYF 65