Pairwise Alignments

Query, 568 a.a., flagellin FliC from Escherichia coli ECOR38

Subject, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  163 bits (413), Expect = 1e-44
 Identities = 120/310 (38%), Positives = 158/310 (50%), Gaps = 43/310 (13%)

Query: 5   INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQA 64
           INTN +S+  Q N+    S+L++S++RLSSGLR+NSAKDDAAG AI+ R  + ++GL+ A
Sbjct: 4   INTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSVA 63

Query: 65  ARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEID 124
           ARNANDGIS+AQT EGAL ++ + LQR+REL VQ++  +N+ SD  ++Q E+     EID
Sbjct: 64  ARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEID 123

Query: 125 RVSGQTQFNGVNVLAKDGSM---KIQVGANDGQTITID-LKKIDSDTLGLNGFN------ 174
           RV+  T FNG  +L  DG+      QVGAN G+ I ID +   +S  LG           
Sbjct: 124 RVAKTTSFNGTKLL--DGTFANATFQVGANAGEGIAIDSIVSANSTALGQLSATEHFVAA 181

Query: 175 VNGKGTIANKAATVSDL-----------TAAGATGTGPYAVTTNNTALSASDALSRLKTG 223
           V    T AN A                  A G  G    A       + A +A S   TG
Sbjct: 182 VAAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGASTTAAQRTTQVVDAINAKS-ADTG 240

Query: 224 DTVTTTGSSA----------ATYTYDAAKGNFTTQATVADGDVVNFANTLKPAAGTTASG 273
                TG+ A          A   + AA   FT  AT A GD      T  P   TT S 
Sbjct: 241 VFARETGAGAYEIFSSRDLTAATDFGAA---FTAAATGAPGD------TAPPGTLTTLSA 291

Query: 274 VYTRSTGDVK 283
           +   S GD +
Sbjct: 292 INVNSFGDAQ 301



 Score =  115 bits (288), Expect = 3e-30
 Identities = 104/296 (35%), Positives = 141/296 (47%), Gaps = 35/296 (11%)

Query: 302 DATGNLSTNNAGIASSAKL-SDLFASGSTLATTGSIQLSGT----TYNFGAAATSGVTYT 356
           +A+ N S   A  A   +L S++     T +  G+  L GT    T+  GA A  G+   
Sbjct: 100 NASNNSSDRTALQAEVTQLRSEIDRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID 159

Query: 357 KTVSAD-TVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGANTNGA----GNSNDTY 411
             VSA+ T L  + +      AV   +   N  I + TA +   N  G     G    + 
Sbjct: 160 SIVSANSTALGQLSATEHFVAAVAAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGAST 219

Query: 412 TDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKF----------------AATVG 455
           T A +  TT     IN     DTG V     GAGA   F                AA  G
Sbjct: 220 TAAQR--TTQVVDAINAK-SADTG-VFARETGAGAYEIFSSRDLTAATDFGAAFTAAATG 275

Query: 456 AQAYVNSTGKLTT----ETTSAGTATKDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTN 511
           A       G LTT       S G A K  L  +D AI+SI+  R+ LGA+Q+R ++AV N
Sbjct: 276 APGDTAPPGTLTTLSAINVNSFGDAQK-ALQVIDKAINSINSSRADLGALQSRFENAVAN 334

Query: 512 LNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 567
           +  T  N+S A+ RI DAD+A E SN+S+AQI+QQAG +++A+ANQ  Q VLSLL+
Sbjct: 335 IQITGENISAARGRIVDADFAKETSNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 390