Pairwise Alignments

Query, 568 a.a., flagellin FliC from Escherichia coli ECOR38

Subject, 381 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  177 bits (449), Expect = 7e-49
 Identities = 140/385 (36%), Positives = 198/385 (51%), Gaps = 33/385 (8%)

Query: 5   INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQA 64
           INTN +S+  Q N+    S+L++S++RLSSGLR+NSAKDDAAG AI+ R  + ++GL+ A
Sbjct: 4   INTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSVA 63

Query: 65  ARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEID 124
           +RNANDGIS+AQT EGAL ++ + LQR+REL VQ++  +N+ SD  ++Q E+     EID
Sbjct: 64  SRNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEID 123

Query: 125 RVSGQTQFNGVNVLAKDGSM---KIQVGANDGQTITID-LKKIDSDTLGLNGFNVNGKGT 180
           RV+  T FNG  +L  DG+      QVGAN G+ I ID +   +S +LG N   V G GT
Sbjct: 124 RVAKTTSFNGTKLL--DGTFANATFQVGANAGEGIAIDSIVSANSTSLG-NTSLVTGAGT 180

Query: 181 I-----ANKAATVSDLTAAGATGTGPYAVTTN--NTALSASDALSRLKTGDTVTTTGSSA 233
           I     AN A     LT  G T  GP A   +         DA++  K+ DT      + 
Sbjct: 181 ITSTAGANVAIAAGALTVKG-TALGPIAAAASAAERTTQVVDAIN-AKSSDTGV---FAR 235

Query: 234 ATYTYDAAKGNFT-TQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDV 292
           ATYT   A G  T ++  +A   V +F      A GT A G    S  D   +V + GD 
Sbjct: 236 ATYTAGVATGFETFSEGAIA---VADFGGFTAAATGTVAVGAAAASQLD-DINVSSFGD- 290

Query: 293 TIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSG 352
               + A       +++ N+  A    L   F +        +IQ++G   +        
Sbjct: 291 ---AQKALKVIDNAINSINSSRADLGALQSRFEN-----AVANIQITGENISAARGRIVD 342

Query: 353 VTYTKTVSADTVLSTVQSAATANTA 377
             + K  S  +    +Q A TA  A
Sbjct: 343 ADFAKETSNLSRAQILQQAGTAMVA 367



 Score =  116 bits (291), Expect = 1e-30
 Identities = 98/289 (33%), Positives = 142/289 (49%), Gaps = 30/289 (10%)

Query: 302 DATGNLSTNNAGIASSAKL-SDLFASGSTLATTGSIQLSGT----TYNFGAAATSGVTYT 356
           +A+ N S   A  A   +L S++     T +  G+  L GT    T+  GA A  G+   
Sbjct: 100 NASNNSSDRTALQAEVTQLRSEIDRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID 159

Query: 357 KTVSAD----------TVLSTVQSAATANTAVT-GATIKYNTGIQSATASFGGANTN--- 402
             VSA+          T   T+ S A AN A+  GA     T +    A+   A      
Sbjct: 160 SIVSANSTSLGNTSLVTGAGTITSTAGANVAIAAGALTVKGTALGPIAAAASAAERTTQV 219

Query: 403 -GAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNG---AGATGKFAATVGAQA 458
             A N+  + T      T TA     +    + G + VA  G   A ATG  A    A +
Sbjct: 220 VDAINAKSSDTGVFARATYTAGVATGFETFSE-GAIAVADFGGFTAAATGTVAVGAAAAS 278

Query: 459 YVNSTGKLTTETTSAGTATKDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTN 518
            ++         +S G A K  L  +D+AI+SI+  R+ LGA+Q+R ++AV N+  T  N
Sbjct: 279 QLDDIN-----VSSFGDAQK-ALKVIDNAINSINSSRADLGALQSRFENAVANIQITGEN 332

Query: 519 LSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 567
           +S A+ RI DAD+A E SN+S+AQI+QQAG +++A+ANQ  Q VLSLL+
Sbjct: 333 ISAARGRIVDADFAKETSNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 381