Pairwise Alignments

Query, 568 a.a., flagellin FliC from Escherichia coli ECOR38

Subject, 395 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  169 bits (429), Expect = 1e-46
 Identities = 137/397 (34%), Positives = 201/397 (50%), Gaps = 44/397 (11%)

Query: 5   INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQA 64
           INTN +S+  Q N++ + S+L++S++RLSSGLR+NSAKDDAAG AI+ R  + ++GL  A
Sbjct: 4   INTNVMSMNAQRNLSSSASSLATSMQRLSSGLRVNSAKDDAAGLAISERMNTQVRGLNVA 63

Query: 65  ARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEID 124
           ARNANDGIS+AQT EGAL ++ + LQR+REL VQ++  +N+ SD  ++  E++    EID
Sbjct: 64  ARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNGSDRTALNAEVQQLRQEID 123

Query: 125 RVSGQTQFNGVNVLAKDGSM---KIQVGANDGQTITID-LKKIDSDTLGLNGFNVNGKGT 180
           RV+  T FNG  +L  DGS      QVGAN G+ I+ID +   +S  LG    +V  K  
Sbjct: 124 RVAKTTSFNGTKLL--DGSFANATFQVGANAGEGISIDSIVNSNSAALGQTAVHVTPKIV 181

Query: 181 IANKAATVSDLTAAGATGTGPYAV------TTNNTALSASDALSRLKTGDTVTTTGSSAA 234
                   + L A  A G  P ++        N   +  +  L++ + G  V    + ++
Sbjct: 182 PPATPVAPAVLAAIPAGGATPLSIDDANGNAVNLGPIGEATTLAQ-RAGQMVDAINAKSS 240

Query: 235 --------TYTYDAAKGN--FTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGD--- 281
                   TYT     G   F  +A VA  D  NF      AAGTT +GV T +  D   
Sbjct: 241 DTGVFARPTYTAGVMDGYEVFAERAVVA-ADFGNF------AAGTTGAGVNTAAAVDSFV 293

Query: 282 VKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLA-TTGSIQLSG 340
              +V++ GD  +  K            +NA  A ++  +DL A  S       +IQ++G
Sbjct: 294 EDINVNSFGDSQLALKV----------IDNAINAINSSRADLGALQSRFENAVANIQITG 343

Query: 341 TTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTA 377
              +          + K  S  +    +Q A TA  A
Sbjct: 344 ENISAARGRIVDADFAKETSNLSRAQILQQAGTAMVA 380



 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 100/407 (24%), Positives = 176/407 (43%), Gaps = 21/407 (5%)

Query: 167 TLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTV 226
           T+  N  ++N +  +++ A++++      ++G    +   +   L+ S+ ++    G  V
Sbjct: 3   TINTNVMSMNAQRNLSSSASSLATSMQRLSSGLRVNSAKDDAAGLAISERMNTQVRGLNV 62

Query: 227 TTTGSS---AATYTYDAAKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVK 283
               ++   +   T + A G             V  AN     +  TA     +    ++
Sbjct: 63  AARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNGSDRTALNAEVQQ---LR 119

Query: 284 FDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTGSIQLSGTTY 343
            ++D     T       LD +   +T   G  +   +S       ++  + S  L  T  
Sbjct: 120 QEIDRVAKTTSFNGTKLLDGSFANATFQVGANAGEGISI-----DSIVNSNSAALGQTAV 174

Query: 344 NFGAAATSGVTYTKTVSADTVLSTVQSAATANTAV---TGATIKYNTGIQSATASFGGAN 400
           +     T  +    T  A  VL+ + +      ++    G  +      ++ T +     
Sbjct: 175 H----VTPKIVPPATPVAPAVLAAIPAGGATPLSIDDANGNAVNLGPIGEATTLAQRAGQ 230

Query: 401 TNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYV 460
              A N+  + T      T TA     Y V  +   V  A  G  A G   A V   A V
Sbjct: 231 MVDAINAKSSDTGVFARPTYTAGVMDGYEVFAERAVVA-ADFGNFAAGTTGAGVNTAAAV 289

Query: 461 NSTGKLTTETTSAGTATKDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLS 520
           +S  +      S G +    L  +D+AI++I+  R+ LGA+Q+R ++AV N+  T  N+S
Sbjct: 290 DSFVE-DINVNSFGDSQL-ALKVIDNAINAINSSRADLGALQSRFENAVANIQITGENIS 347

Query: 521 EAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 567
            A+ RI DAD+A E SN+S+AQI+QQAG +++A+ANQ+PQ VLSLL+
Sbjct: 348 AARGRIVDADFAKETSNLSRAQILQQAGTAMVAQANQIPQGVLSLLR 394