Pairwise Alignments

Query, 568 a.a., flagellin FliC from Escherichia coli ECOR38

Subject, 495 a.a., Flagellar biosynthesis protein FliC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  401 bits (1030), Expect = e-116
 Identities = 264/572 (46%), Positives = 332/572 (58%), Gaps = 82/572 (14%)

Query: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60
           MAQVINTNSLSL+TQNN+NK+QSAL ++IERLSSGLRINSAKDDAAGQAIANRFT+NIKG
Sbjct: 1   MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKG 60

Query: 61  LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRL 120
           LTQA+RNANDGIS+AQTTEGAL+EINNNLQR+REL VQ++  TNS SDLDSIQ EI  RL
Sbjct: 61  LTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRL 120

Query: 121 DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGT 180
           +EIDRVSGQTQFNGV VLA+D ++ IQVGANDG+TI IDLK+I+S TLGL+  NV  K  
Sbjct: 121 NEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYK 180

Query: 181 IANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAATYTYDA 240
           +++ AATV        TG     +  +N+   AS       TG    T         +D 
Sbjct: 181 VSDTAATV--------TGYADTTIALDNSTFKAS------ATG-LGGTDQKIDGDLKFDD 225

Query: 241 AKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAY 300
             G +  + TV                GT   G Y     +V  D   NG+VT+ G A  
Sbjct: 226 TTGKYYAKVTV--------------TGGTGKDGYY-----EVSVD-KTNGEVTLAGGATS 265

Query: 301 -----LDATGNLSTNNAGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTY 355
                L AT      N  +A+    +DL  + + L   G           G A+   ++Y
Sbjct: 266 PLTGGLPATATEDVKNVQVAN----ADLTEAKAALTAAGVT---------GTASVVKMSY 312

Query: 356 TKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDAD 415
           T                   T   G  +K      SAT      N +G+ + N T   AD
Sbjct: 313 TDN--------------NGKTIDGGLAVKVGDDYYSAT-----QNKDGSISINTTKYTAD 353

Query: 416 KELTTTASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGT 475
              + TA   +    D  T  V++      A+        AQ  +           +A T
Sbjct: 354 DGTSKTALNKLG-GADGKTEVVSIGGKTYAASKAEGHNFKAQPDL---------AEAAAT 403

Query: 476 ATKDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 535
            T++PL  +D A++ +D  RS LGA+QNR +SA+TNL NT  NL+ A+SRI+D+DYATEV
Sbjct: 404 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 463

Query: 536 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 567
           SNMS+AQI+QQAG SVLA+ANQVPQ VLSLL+
Sbjct: 464 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 495