Pairwise Alignments

Query, 568 a.a., flagellin FliC from Escherichia coli ECOR38

Subject, 506 a.a., Flagellar biosynthesis protein FliC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  405 bits (1042), Expect = e-117
 Identities = 275/580 (47%), Positives = 333/580 (57%), Gaps = 87/580 (15%)

Query: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60
           MAQVINTNSLSL+TQNN+NK+QSAL ++IERLSSGLRINSAKDDAAGQAIANRFT+NIKG
Sbjct: 1   MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKG 60

Query: 61  LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRL 120
           LTQA+RNANDGIS+AQTTEGAL+EINNNLQR+REL VQ++  TNS SDLDSIQ EI  RL
Sbjct: 61  LTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRL 120

Query: 121 DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGT 180
           +EIDRVSGQTQFNGV VLA+D ++ IQVGANDG+TI IDLK+I+S TLGL+  NV     
Sbjct: 121 NEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNV----- 175

Query: 181 IANKAATVSDLTAAGATGTGPYAVTTNNTALSAS---DALSRLKTGDTVTTTGSSAATYT 237
              KA  V D      T     A   N T L  S   DA  +  TG T  T   +     
Sbjct: 176 --QKAYDVKD------TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGTASVTGGAVK 227

Query: 238 YDAAK-------GNFTTQATVADGDV-VNFA--NTLKPAAGTTASGVYTRSTGDVKFDVD 287
           +DA         G FT      +GD  VN A   T+  AAG T + +   +T   K +V 
Sbjct: 228 FDADNNKYFVTIGGFTGADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGAT--TKTEVQ 285

Query: 288 ANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGA 347
              D           A  +    NA IA     +D  A+G+ L        +G T   G 
Sbjct: 286 ELKDT---------PAVVSADAKNALIAGGVDATD--ANGAELVKMSYTDKNGKTIEGGY 334

Query: 348 AATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGANTNGAGNS 407
           A  +G  Y      D     +++  T+ TA  G T       ++A    GG         
Sbjct: 335 ALKAGDKY-YAADYDEATGAIKAKTTSYTAADGTT-------KTAANQLGG--------- 377

Query: 408 NDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLT 467
                D   E+ T    T N            AS  AG   K      AQ  +      T
Sbjct: 378 ----VDGKTEVVTIDGKTYN------------ASKAAGHDFK------AQPELAEAAAKT 415

Query: 468 TETTSAGTATKDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQ 527
           TE         +PL  +D A++ +D  RS LGA+QNR +SA+TNL NT  NLSEA+SRI+
Sbjct: 416 TE---------NPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIE 466

Query: 528 DADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 567
           D+DYATEVSNMS+AQI+QQAG SVLA+ANQVPQ VLSLL+
Sbjct: 467 DSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 506