Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein FliF from Escherichia coli ECOR38

Subject, 566 a.a., flagellar M-ring protein from Agrobacterium fabrum C58

 Score =  162 bits (411), Expect = 2e-44
 Identities = 116/406 (28%), Positives = 190/406 (46%), Gaps = 25/406 (6%)

Query: 29  GSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPAD 88
           G  ++A+++A  L+   P Y TL+  L   D   I   L +  + ++      +++VP  
Sbjct: 35  GVLSMAIILAAALYVNRPAYETLYVGLEKSDLNKISIALAESGLDFQVGTDGSSLQVPVG 94

Query: 89  KVHELRLRLAQQGLPKGGAVGFELLDQE-KFGISQFSEQVNYQRALEGELSRTIETIGPV 147
              + RL LA++GLP     G+EL D     G++ F ++V   RALEGE+ R+I+ I  V
Sbjct: 95  LTSKARLLLAERGLPDSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGV 154

Query: 148 KGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNV 207
             ARVH+ +P    F R ++ P+ASV +      +      ++I HLV+SAV GL   +V
Sbjct: 155 SAARVHIVLPDVGNFRRGEQKPTASVMIRA--SASAGRKASASIRHLVASAVPGLEVDDV 212

Query: 208 TLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQL 267
           TL+D  G LL   +       +  L  A +V+  I   I+  L+P +G  N  + VTAQ+
Sbjct: 213 TLLDSTGQLLASGDDVTNAAMNRSLTLAQNVQQEITTNIDKALAPFLGIDNFRSSVTAQI 272

Query: 268 DFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPIST 327
           +  S++  E  Y P   ES      R + E ++S    P               N P + 
Sbjct: 273 NTDSRQVQETVYDP---ESRVERSVRTVKEDQKSQETQP-------DTAATVEQNVPQAA 322

Query: 328 PPANQNNRQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKT 387
           P       Q        S  +S ++ E +NYE++     T  N   ++++SVAVVVN   
Sbjct: 323 PQGGGGGPQ--------SSDQSAKKEEQTNYEINSKTVATVKNGYTLEKISVAVVVNKGR 374

Query: 388 LPD--GKPLPLS--NEQMKQIEALTREAMGFSEKRGDSLNVVNSPF 429
           +    G+P   +  +  + +++ +   A G S  RGD + +    F
Sbjct: 375 IAKMVGEPADQAKIDAYLAEMQKIVTSAAGISSDRGDIVTLTAMDF 420