Pairwise Alignments

Query, 116 a.a., HNH endonuclease from Escherichia coli ECOR38

Subject, 277 a.a., e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) from Escherichia coli BW25113

 Score = 40.4 bits (93), Expect = 2e-08
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%)

Query: 54  IRARILKRDNHLCQNCLRNGRAV-----EARTVDHIIPKAHGGTDADSNLQSLCWPCHK- 107
           ++A IL++   +C+NC +N             V H+IP + GG D   N  +LC  CH+ 
Sbjct: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254

Query: 108 ---AKTARERI 115
              +K A+E I
Sbjct: 255 LHYSKNAKELI 265