Pairwise Alignments

Query, 368 a.a., putative multidrug ABC transporter permease YbhR from Escherichia coli ECOR38

Subject, 372 a.a., ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  148 bits (373), Expect = 3e-40
 Identities = 109/378 (28%), Positives = 184/378 (48%), Gaps = 22/378 (5%)

Query: 3   HRLWTLIR---KELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGE 59
           HRL   +R   KEL SL  +      L+    + + +    + + V NA++A+ DED+  
Sbjct: 2   HRLAHTLRLGLKELTSLRHDSVLLLFLLYAFSVAIYMPAAGSVIGVHNASVAVIDEDHSL 61

Query: 60  HSVELTQ-----RFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQT 114
            S +LT+      F RA    +        ++   +D+ +   ++  P +F   L   ++
Sbjct: 62  VSRKLTEALQPPEFQRAVPLAY-------NQLDQAMDSGQYTFVINVPVNFQTDLLAGRS 114

Query: 115 APLQLILDGRNSNSAQIAANYLQQIVKNYQLELL-EGKPKPNNSELV-VRNWYNPNLDYK 172
             LQ+ +D    + A + A Y+ +IV+   L+   +G     +  L+  R  +NPNL+  
Sbjct: 115 PELQVNVDATAMSQAFMGAGYIGRIVERELLDYANQGSATAGSPALLSARALFNPNLEGG 174

Query: 173 WFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIF---IGKAVPALIV 229
           WF+    I    TI  +++T  ++ RERE GTLD LLV PLT  +I    IG     +++
Sbjct: 175 WFLAVIQIVNNITILAIVLTGTALLREREHGTLDHLLVLPLTALEIMLAKIGSNALVVVL 234

Query: 230 ATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVF 289
            T+ +  V+  G  A  +P AGSL LF     +Y  +    G+ +++L  +  Q  +   
Sbjct: 235 CTWVSLEVIVKG--ALGVPLAGSLGLFLAVTALYLFASTALGIFLATLARSTPQFGLLAI 292

Query: 290 VFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLL 349
             ++P +LLSG  +P+++MP WLQ +   +P  HF  ++  I  +DA L +VW  L  L 
Sbjct: 293 PVIIPMLLLSGGSTPLDSMPQWLQWVMQGSPSTHFVSLSAAILFRDAGLPVVWPDLAALA 352

Query: 350 VITATTGSAAYAMFRRKV 367
            I     + A A FRR +
Sbjct: 353 AIGLAFFAIALARFRRSL 370