Pairwise Alignments

Query, 370 a.a., peptidoglycan glycosyltransferase MrdB from Escherichia coli ECOR38

Subject, 382 a.a., rod shape-determining protein RodA from Pseudomonas sp. S08-1

 Score =  392 bits (1007), Expect = e-114
 Identities = 194/364 (53%), Positives = 266/364 (73%), Gaps = 1/364 (0%)

Query: 7   KKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLVIMVVMAQI 66
           + T   ++H+D  +LLILL L   S  V++SASG++  ++ ++     +GLV  +V+AQ 
Sbjct: 19  RATLLQRLHIDGWLLLILLVLCAGSLFVLYSASGKNWDLVIKQGTSFGIGLVAAIVIAQF 78

Query: 67  PPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRWLDL-GIVRFQPSEIAKIAVPLMVA 125
            PR    W P  Y+  + LL AV+  G  + GA RW+++ G++RFQPSE  KI +P  +A
Sbjct: 79  EPRFMARWVPLAYLAGVGLLTAVEVMGHTAMGATRWINIPGVIRFQPSEFMKIIMPATIA 138

Query: 126 RFINRDVCPPSLKNTAIALVLIFMPTLLVAAQPDLGTSILVALSGLFVLFLSGLSWRLIG 185
            ++ R   PP LK+ AI+LVLI +P +L+  QPDLGT++L+  SG FVLF++GL WR I 
Sbjct: 139 WYLARHNLPPKLKHIAISLVLILVPFVLILKQPDLGTALLILASGAFVLFMAGLQWRWII 198

Query: 186 VAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPESDPLGAGYHIIQSKIAIGSGGLRGKGW 245
            AV  VA     +WFF++ +YQ+QRV+  LDPESDPLG G++IIQSK AIGSGG+ GKGW
Sbjct: 199 GAVAAVAPIAVGMWFFVLREYQKQRVLTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKGW 258

Query: 246 LHGTQSQLEFLPERHTDFIFAVLAEELGLVGILILLALYILLIMRGLWIAARAQTTFGRV 305
           L GTQS L+FLPE HTDFI AVL+EE G+VG+ ILL +Y+LLI RGL I A+AQT FG++
Sbjct: 259 LLGTQSHLDFLPESHTDFIIAVLSEEFGMVGVCILLFVYMLLIARGLVITAQAQTLFGKL 318

Query: 306 MAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIHTHRKM 365
           +AG L +  FVYVFVNIGMVSG+LPVVGVPLP +SYGG+ L+ L++GFG++M+I THRK 
Sbjct: 319 LAGSLTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTHLVTLLSGFGVLMAIQTHRKW 378

Query: 366 LSKS 369
           ++++
Sbjct: 379 IAQA 382