Pairwise Alignments

Query, 285 a.a., formate transporter FocA from Escherichia coli ECOR27

Subject, 298 a.a., putative inner membrane protein from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 37/245 (15%)

Query: 35  FYLAITAGVFISIAFV----FYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLF 90
           ++ A+ AG+ + ++ +    FY     G G      A++V  I +S G +  ++    LF
Sbjct: 51  WWSALAAGLSMGLSLMAMGLFYARLPEGAG------AQVVASIGYSAGFLAVILARQQLF 104

Query: 91  TS---TVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147
           T    T ++ V  A     +G+L + W  V  GNL G L   L+ W+  E    + +  +
Sbjct: 105 TENTLTAVLPVMTAPTLANFGRLLRLWGVVLLGNLAGTL---LVAWVMLELPIFDSKTDV 161

Query: 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGF 207
             L+     + +   +    GI++  M+   VWM  S      K +I+++   +     F
Sbjct: 162 AFLEVGRKVMKNDISQMFAKGIVSGWMIATMVWMIPSMEHA--KIWIILMITYLMALGDF 219

Query: 208 EHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGG 267
            H +     +   +    +A  E W+                F  +  +P   GNIIGG 
Sbjct: 220 THIVVGSVEVSYLV----WAGDETWS---------------RFWLEFALPTLAGNIIGGS 260

Query: 268 LLVGL 272
            +  L
Sbjct: 261 FIFAL 265