Pairwise Alignments

Query, 319 a.a., aliphatic sulfonate ABC transporter substrate-binding protein SsuA from Escherichia coli ECOR27

Subject, 314 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  210 bits (534), Expect = 4e-59
 Identities = 124/309 (40%), Positives = 179/309 (57%), Gaps = 8/309 (2%)

Query: 8   ALVGLLSVSTIAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQSKI--SWVEFPA 65
           A+ GLL+ S +AV+AE+  E +RIGYQK S  + L K+   LEK      I  SW EFP+
Sbjct: 9   AVAGLLAFS-VAVSAEAQ-ETVRIGYQKSSTLITLLKTQGTLEKALKADNIDVSWHEFPS 66

Query: 66  GPQMLEALNVGSIDLGS-TGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTV 124
           G  +LEALNVG++D+ +   D  PIFAQAA A L Y   E P P A+ I+V ++SPI+ +
Sbjct: 67  GLPLLEALNVGNVDISADVADTVPIFAQAAQAKLTYFAQEAPSPSAQAIVVRKDSPIQQL 126

Query: 125 ADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWD 184
           ADLKG K+A  K + +H LL+ AL Q GL+F+DI P YL+PAD RAAF+   VDAW  W+
Sbjct: 127 ADLKGKKIAVTKAAGTHYLLIAALAQTGLEFSDITPAYLSPADGRAAFENNKVDAWVTWE 186

Query: 185 PYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQR 244
           P+ ++   Q   R L DG  L     +YL   PYA+ +   ++ V A   +     ++  
Sbjct: 187 PFLTSVQRQLPTRTLADGAGLASYKRYYLTGTPYAKAHPDVLKVVYAQLEKTGQWVKTHP 246

Query: 245 EQSIALLAKTMG-LPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVD 303
           + +  +L    G L    + +   HR    ++PV  +    QQ+ AD F++  L+PK VD
Sbjct: 247 QDAAKVLGPLWGNLDVATVEAANAHR-SYQVQPVTIDQLGEQQKIADAFFKAGLLPKAVD 305

Query: 304 IRQ-RIWQP 311
            +  + W+P
Sbjct: 306 AKDVQTWKP 314