Pairwise Alignments

Query, 319 a.a., aliphatic sulfonate ABC transporter substrate-binding protein SsuA from Escherichia coli ECOR27

Subject, 312 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  179 bits (454), Expect = 8e-50
 Identities = 111/298 (37%), Positives = 153/298 (51%), Gaps = 7/298 (2%)

Query: 19  AVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQS--KISWVEFPAGPQMLEALNVG 76
           A  A  + + L I YQ+ S   +L K +  LE+R       ++W EF  G  +L +LN G
Sbjct: 15  AATAAHAEQTLDISYQRSSTLWILLKQNGHLEQRLKPLGFTVNWHEFSTG--LLSSLNAG 72

Query: 77  SIDL-GSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQ 135
           S+DL     D   +F QAA A L Y   E     A+ I+V + SPI ++ADLKG  VA  
Sbjct: 73  SVDLHADVADAFALFTQAADAPLTYYAQENSSSSAQAIIVQDQSPIHSIADLKGKTVAVS 132

Query: 136 KGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGG 195
           KGS SH LL+ ALR+AGL   DI P YL   D  AAF  G+VDAW IWDP+ +   L   
Sbjct: 133 KGSGSHYLLISALRKAGLTLADITPRYLEAPDGGAAFANGSVDAWVIWDPFLATQQLDHH 192

Query: 196 VRVLKDGTD-LNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKT 254
           VRV+ DG D L     FY+A   +A+ +   +Q    T  E     ++  +++  +L   
Sbjct: 193 VRVIADGKDGLADYNRFYMATTRFAKAHPDVLQVTFDTLRETGQWVKAHPKEAAEILGPL 252

Query: 255 MGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQ-RIWQP 311
            G  AP      + R    I PV  E  A QQ+ AD +Y  +L+PK + +    +W P
Sbjct: 253 WGNIAPATVERANSRRSYDIIPVKVENLAEQQRIADTYYAAKLIPKPLKVSAITVWTP 310