Pairwise Alignments

Query, 319 a.a., aliphatic sulfonate ABC transporter substrate-binding protein SsuA from Escherichia coli ECOR27

Subject, 365 a.a., Alkanesulfonates-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  233 bits (593), Expect = 7e-66
 Identities = 126/295 (42%), Positives = 178/295 (60%), Gaps = 5/295 (1%)

Query: 12  LLSVSTIAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQS--KISWVEFPAGPQM 69
           L S+  +   A+++    R+G+QKG + ++  K    LE+R      KISW EF AGP  
Sbjct: 66  LASLPGLPAQAQTANRVFRVGHQKGFLSLL--KGRGTLEQRLAPLGVKISWTEFTAGPVQ 123

Query: 70  LEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKG 129
           LEALNVGSID G  G+ PPIFAQAAGA L YV    P+P  E +LV ++SPIKTVADLKG
Sbjct: 124 LEALNVGSIDFGDVGEAPPIFAQAAGAPLAYVAATVPRPATEAVLVPKDSPIKTVADLKG 183

Query: 130 HKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSA 189
            KVA+ KGS+ H  L++ L + GLK+ D+Q  +L PADARAAF++G VDAW IWDP+ +A
Sbjct: 184 KKVAYNKGSNVHYFLVKLLEKNGLKYDDVQSVFLPPADARAAFEKGAVDAWVIWDPFLAA 243

Query: 190 ALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIA 249
           A +    R+L D T +    ++Y +   YA +N   I+ V+   ++ D    + R+   A
Sbjct: 244 AEVGLNGRILADATGVVNNRAYYFSTLDYAARNADVIKIVIEEINKLDQWGSANRDALAA 303

Query: 250 LLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDI 304
             A   GLP PV+   +  +   T  P+   +   QQ  AD F+  +L+PKK+++
Sbjct: 304 EFAPLWGLPKPVVDRSVTRQVYGT-GPITKAILQEQQVIADTFFNLKLIPKKINV 357