Pairwise Alignments

Query, 319 a.a., aliphatic sulfonate ABC transporter substrate-binding protein SsuA from Escherichia coli ECOR27

Subject, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

 Score =  219 bits (558), Expect = 7e-62
 Identities = 127/319 (39%), Positives = 185/319 (57%), Gaps = 13/319 (4%)

Query: 4   IIKLALVGLLSVSTIAV------AAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQS- 56
           I +   +GLL+ ST AV       A ++   LRIG+QK  + + LAKS   LE       
Sbjct: 2   ITRRGTLGLLAGSTGAVFLPHIRRAGAATTTLRIGWQKNGV-IALAKSQGALEALLKDRG 60

Query: 57  -KISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILV 115
            ++ W EF +GP +LEAL  G++D+G TGD+PP+FAQAAG +L YVG          ILV
Sbjct: 61  IEVKWSEFSSGPPLLEALGAGALDIGPTGDVPPLFAQAAGGNLRYVGTYKAAAGGSAILV 120

Query: 116 AENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQG 175
            ++SP+KT+ DLKG KVAF++GSS+HN+ ++ALR+AGL  +DI P  L P DA AAF+ G
Sbjct: 121 QKDSPLKTLEDLKGKKVAFKRGSSAHNVTVKALRKAGLTLSDITPVDLAPPDAAAAFRSG 180

Query: 176 NVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSE 235
           ++DAW+IWDPY++ A  +   RVL     +    S++LA   + E N   +  +L   + 
Sbjct: 181 SIDAWSIWDPYFAVAEKEPTTRVLSTAEGIVDPWSYFLANGDFVEANPDLVPLILKELAN 240

Query: 236 ADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNA---EVAALQQQTADLF 292
             A  ++  + +   LA   G+P  V    L  RP   +  V+    E  A QQ  AD F
Sbjct: 241 VGAKAQANIDATAKSLAAITGVPEDVTKVSLT-RPGADLGRVSLVPDEAIAYQQALADEF 299

Query: 293 YENRLVPKKVDIRQRIWQP 311
           Y+ ++VPKK+ +   +W+P
Sbjct: 300 YDLKIVPKKLKVTDIVWRP 318