Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECOR27

Subject, 348 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens GW456-L13

 Score =  213 bits (542), Expect = 5e-60
 Identities = 119/308 (38%), Positives = 186/308 (60%), Gaps = 12/308 (3%)

Query: 9   IVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLAT 68
           I++KR K  + G   G+WKIA+ADF TAMMAFFLV+WL+S ++P++ I IA YF+ P+  
Sbjct: 7   IIIKRVKRIAGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFKDPIGF 66

Query: 69  AVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPN--------IEELKKRMEQSRLRKLRG 120
           + +G   I +         ++    + +   QP+        +E + +++E+ RL  L  
Sbjct: 67  SESGTPYIIDLGGTPTLAPENTLNPEVKSQPQPDKVTIDTDQVEGMAEQVEKERLELLLQ 126

Query: 121 DLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIA 180
           +L   +E +P+++  +  +  ++  +GLRIQI+D++NRPMF +GSA ++PY  DIL A+A
Sbjct: 127 ELQNKVEENPQMQKFKDQILFEITPDGLRIQIMDAENRPMFDSGSARLKPYFEDILLAMA 186

Query: 181 PVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVG 240
             +  +PN+IS+SGHTD  PY +G   + NWELSA+RANA+RR L+ G     +V RVVG
Sbjct: 187 DTIKAVPNKISISGHTDAKPY-TGTGDFGNWELSANRANAARRALVAGSYPDAQVARVVG 245

Query: 241 MAATMRLSDRGPDDAVNRRISLLVLNKQAEQAIL-HENAESQNEPVSALEKPEVAPQVSV 299
            A++       P + VNRRI ++VL K+A++AI   + AE   +       P  AP  + 
Sbjct: 246 YASSALFDREHPFNPVNRRIDIVVLTKKAQRAIEGSQGAEPAPDAPQGSPAPGAAP--AA 303

Query: 300 PTMPSAEP 307
           P  P+A P
Sbjct: 304 PVDPNALP 311