Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECOR27

Subject, 341 a.a., Motility protein B from Azospirillum sp. SherDot2

 Score =  166 bits (420), Expect = 7e-46
 Identities = 116/340 (34%), Positives = 158/340 (46%), Gaps = 71/340 (20%)

Query: 2   KNQAHPIIVVKRRKAKSHGAA--HGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIA 59
           +  A P I+VKR     H     +G+WK+AYADF+TAMM FFLVMWL++I++ ++   IA
Sbjct: 3   RKTALPPIIVKRHLGSHHDEEEHNGTWKLAYADFVTAMMTFFLVMWLMNITTTEQRKGIA 62

Query: 60  EYFRT-----------------------PLATAVTGGDRISNSESP--IPGGGDDYTQSQ 94
           +YF                          L T    GD+ S   SP  +   GD   Q  
Sbjct: 63  DYFNPVAVSQSNSGADGMLAGRSVDKSGSLTTPNAAGDQASPVASPPVVASVGDSDRQPA 122

Query: 95  GEVNKQPN--------------------------------------IEELKKRM-----E 111
           G  +  P+                                      +E L  R      E
Sbjct: 123 GRRDPMPHPPGGTVPPVDLLRPATESAPAASATEAPAPTVQATRAELEALLDRQSSELTE 182

Query: 112 QSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPY 171
           ++ L  L  DL Q I + P L AL+  L I  V EGLR+Q+ D     MF+ GSA +   
Sbjct: 183 KAALESLERDLRQRIAASPDLSALQASLVIQQVPEGLRVQLTDQARFSMFKVGSAQMNDQ 242

Query: 172 MRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLD 231
            R ++R +A  L  +PN I ++GHTD   YA   K Y NWELS+DRANA+RREL+  G+ 
Sbjct: 243 GRRLMRMVAAALASVPNPIGITGHTDALGYAPDAK-YGNWELSSDRANAARRELLASGIP 301

Query: 232 SGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQ 271
            G+++RV G A         P D  NRRIS+ +L + A Q
Sbjct: 302 GGRIVRVEGRADLDHFGASDPLDPSNRRISITLLRRPAGQ 341