Pairwise Alignments

Query, 311 a.a., L,D-transpeptidase from Escherichia coli ECOR27

Subject, 334 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  246 bits (629), Expect = 4e-70
 Identities = 137/295 (46%), Positives = 184/295 (62%), Gaps = 8/295 (2%)

Query: 16  ASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVF 75
           A   + AV YPLPP GSRLVGQ+ T TV + +   L+  A ++      +LEAN      
Sbjct: 17  AIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKN-LQAIARRFDTAAMLILEAN-NTIAP 74

Query: 76  LPKSGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRN 135
           +PK G+ +TIP QL+LP   R+GI+VN+AE+RLYYYPP  N V+V+PIGIG  G ETP  
Sbjct: 75  VPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPV- 133

Query: 136 WVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGR---LYAIH 192
             T V +K   PTWTPT   R+   +RG  LP  VPAGP+NP+G YA+ +      Y IH
Sbjct: 134 METRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIH 193

Query: 193 GTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHE 252
           GT+A   +GLRVS GCIR+   DIK LF +V  GT V++I++PVKY+ EP+G  ++EVH 
Sbjct: 194 GTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHR 253

Query: 253 PLSRNRAEYESDRKVPLPVTPSLRAFISGQEVDVNRANAALQRRSGMPVQISSGS 307
           PLS    E ++ + +P  +      F   + VD    + AL RR+G PV +SSG+
Sbjct: 254 PLSAE--EQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGA 306